Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g01250 ATGTTGACATTTAGTACGGTGCGTAATCCGTGTTGGAGGATTAGAATAGGAACTTTGAAGTCTCGAACGCAGAAAGCTAGCAAACaagcaagagagagagagagagtcgACGTCAGAGCTATGGAGTTTGGTGCAGCTTCGGGAAGATCTGGCGGTGGTCATGGAGGTGGAGTAGTTAAGGACGAGAAGAGAAACGAATCTAGTGGTGGTGGTGATGATGAAAGTCGTCGTCAAGACGAGGCTGTTGATCATAATAAGGTTGCTGATCCAGTGACTATTACTGCAACATCCATGGTGGAGACTACTGCATCAATAGCAtcaaccaaaaatgaaaagGTGGGTGAGCTTGAGTCTGCTATGGCAGAAATGAGTGAGGTGAGAGAAGAGAATCAAAGGTTAAAGACGTGTTTGGATCGGATATTGAAGGATTATCGATCACTGCAGATGCAATTCCAAGACATAGTTCAAGctcaacaagaaacaaaaaggtCTCctgataaagaaaataatgacatTAATGATCAAGAACTAACTGAGGAATCCGAGCTAGTTTCTCTCAGCCTTGGAAGGGTTCCACGTAATCCAAAAAGCGAAGATCAAACTCGAGTATCAAAAGAATTGAAGGGAGAGGAATTTAAAGAAGAGTTGTCTCTAGGACTGGACTGCAAATttgaaacaacaaaatcagGTGGAACTGGGAGCACGACTGAAAATTTGCCAATTCCTAGCCCAACCAATTGCTCTGAAGTACCAAAGGAAGAAGCCGGGGAGACTTGGCCACCAAGTAACGTACTCAAAACGTTGAGAGATAATAATGGAGATGCCGATGAAGTTTCCAAACAAAATCCTGCAAAGAGAGCTAGAGTTTGTGTGAGAGCAAGATGTGACACCCCAACTATGAACGATGGATGCCAATGGAGGAAATATGGACAAAAGATTGCGAAGGGAAATCCTTGTCCTCGGGCTTACTATCGTTGCACAGTTGCACCATCATGCCCAGTCAGAAAACAGGTGCAAAGATGGGTTGAAGACATGTCCATTTTAATAACAACATATGAAGGGACCCACAACCACCCTCTTCCTCTTTCGGCCACTGCTATAGCTTCCACAACTTCGGCAGCAGCTTCCATGCTTTTGTCTGGCTCATCAACCTCTCGTTCAACAGATCTCAATGGCCTCAACTTTTATCTATCAGATAACGGCTCCAAAGCACAGCAATACTACCTCTCCAATCCTGCACTATCATCTCCATCGCCTTCACACCCAACTATCACTCTTGACCTCACTTCAAACCCAGCCGTTTCCCAGTTTGGCAGATTAATCAATCCAAACTACAATCCTTCAAgattctcttcttcctccacCACAAGCCTGAACTTTAGCACTTCCTCTCAATCCAATGGACTGTCTTGGAGCAATGGATTCCTCAGCTACGGAACTCAACCTCAAtcatataataacaataacaggAACATTCTGAGCAACATAAACCTTGGAAAATCACAGCAACCGATAATGGAAATCAATAATATCTTCCAATCCTACCTGCAGAAGAACATTACCTCAACTCCTTCTTCTCAAGCTCAAGTTCAAGCTCAAGCTCAAGCTCAACATTCTCTGCCAGATCATACCATAGCCGCTGCAACGAAAGCGATCACAGCTGACCCCACGTTTCAGTCTGCATTGGCTGCTGCTCTTACTTCTATTATTGGTAATGGAAGTAGTGGGATTGGTGGAACCTTATCAGGGAATCAAGGACAGGTTGGTGTTGGAGAAAATTTGAgtcaaaatatgaaatggGGAGAGCTGTTTCCACCGCCGACGTCAACTTCTAAAGTCAATGGTTGTGGGTCAAGCTTCTTGAGCAAAACCTCAACAACTGCACCGTCGACGTCAAGTTTGATGTTTCATCCGCCGTCTTTGCCATTTGCTAGCTCCAAAAGCGCATCTGCATCTCCAGATAATAATAGAGACAACACCAACTA 1985 0.4136 MEFGAASGRSGGGHGGGVVKDEKRNESSGGGDDESRRQDEAVDHNKVADPVTITATSMVETTASIASTKNEKVGELESAMAEMSEVREENQRLKTCLDRILKDYRSLQMQFQDIVQAQQETKRSPDKENNDINDQELTEESELVSLSLGRVPRNPKSEDQTRVSKELKGEEFKEELSLGLDCKFETTKSGGTGSTTENLPIPSPTNCSEVPKEEAGETWPPSNVLKTLRDNNGDADEVSKQNPAKRARVCVRARCDTPTMNDGCQWRKYGQKIAKGNPCPRAYYRCTVAPSCPVRKQVQRWVEDMSILITTYEGTHNHPLPLSATAIASTTSAAASMLLSGSSTSRSTDLNGLNFYLSDNGSKAQQYYLSNPALSSPSPSHPTITLDLTSNPAVSQFGRLINPNYNPSRFSSSSTTSLNFSTSSQSNGLSWSNGFLSYGTQPQSYNNNNRNILSNINLGKSQQPIMEINNIFQSYLQKNITSTPSSQAQVQAQAQAQHSLPDHTIAAATKAITADPTFQSALAAALTSIIGNGSSGIGGTLSGNQGQVGVGENLSQNMKWGELFPPPTSTSKVNGCGSSFLSKTSTTAPSTSSLMFHPPSLPFASSKSASASPDNNRDNTN 621
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g01250 621 MobiDBLite consensus disorder prediction 120 134 - -
Bva06g01250 621 SMART WRKY_cls 260 320 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bva06g01250 621 MobiDBLite consensus disorder prediction 184 243 - -
Bva06g01250 621 PANTHER WRKY TRANSCRIPTION FACTOR 61-RELATED 40 617 - -
Bva06g01250 621 ProSiteProfiles WRKY domain profile. 255 321 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bva06g01250 621 Pfam WRKY DNA -binding domain 261 319 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bva06g01250 621 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 40 617 IPR044810 GO:0003700
Bva06g01250 621 SUPERFAMILY WRKY DNA-binding domain 253 321 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bva06g01250 621 MobiDBLite consensus disorder prediction 602 621 - -
Bva06g01250 621 MobiDBLite consensus disorder prediction 1 53 - -
Bva06g01250 621 MobiDBLite consensus disorder prediction 187 205 - -
Bva06g01250 621 Coils Coil 69 96 - -
Bva06g01250 621 MobiDBLite consensus disorder prediction 16 46 - -
Bva06g01250 621 MobiDBLite consensus disorder prediction 155 170 - -
Bva06g01250 621 MobiDBLite consensus disorder prediction 117 170 - -
Bva06g01250 621 Gene3D WRKY domain 245 322 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g01250 Bva-Chr6 9605082 9608711 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g01250 83 582 WRKY Transcription Factor Family AT5G15130 41.155 1.50e-84 272
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Bva06g01250 WRKY 3.2e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g01250 - - gmx:100804403 533.872
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g01250 06 9605082 9608711 Bva05g00452 05 2234077 2237079 ECH
Bva03g01286 03 12537111 12540217 Bva06g01250 06 9605082 9608711 ECH
Bva08g01450 08 7591589 7595149 Bva06g01250 06 9605082 9608711 ECH
Bva06g01250 06 9605082 9608711 Bva06g01250 06 9605082 9608711 ECH