Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g01247 ATGGGGAAGTCACCAGGAAAATGGATAAAACATGTGCTGTTCGGTAAAAAGTCATCCAAATCTAACTTTTCTAAAGAAAGAGAGAAACATGTTAATGAAAAATTCGTCACTTCCAAGGCATCGGAAACTGGTTTGGCTTTAGATCCAACCCCCAATACAATTGTCAGAAATGAGCCGAACTTAGAACTGGAGCATAAAGAAGCAGAAAATATTTCCCCTGAGAATCAGGAAATAGATGTTGTCGAACCTGTTCATCAAGATGATGCACCACTTGATCCAGAGAAAATCAGGAAGGAGGAGGCTGCAACGAAGGCACAGGCTGCTTTTAGGGGttatttgGCTCGCAGAGCTTTTAGGGCTCTAAAAGGCATAATAAGGTTGCAAGCGCTTATCCGTGGACACTTAGTTAGAAGACAAGCTGTTGCTACTTTCTGCTGTATGTATGGAATTGTCAAGTTACAAGCACTTGTTCGTGGAGGAAGAGTTAGACAATATGTTGTTGGATTTAAAATCCATGATAAGTGCAATCTAGTGAAGCGTCAGGATGGCAAACTTGTCAATGCAATTGGTATAACCCCTAAAATTGCAAGACTGTCAACAAATGCTTTCATCTGTGAGCGTCTTGCTTCTTCAACGACAATTATGGCGCTGCGCCTCCAATATGTTCCTGGGGATCCAAATTCAGTTCTAAGTTGGTTGGAACGGTGGTCTGTATCTCACTTCTGGAAGCCAGTTCCCCAACCCAAGAAAATTCCATACTCTAAATCTCACAGAAAACAGGGTGGTAATAATGCAGTTGGGGAAACTCTTCTGAGCAAGTCAAAACGTACCAACAGGAAGCCTTCGAATGCAAATTTTGACTCAGTCTCTGCACAAACCAATACTGAACTTGAGAAACCAAAACGAAACATAAGAAAAGTTTCAAGCCAACAGTCCACCGATCCAGTGCAGGAAAATCCACAGAGTGAACTTGAAAAAGTTAAGCGTAGCTTGAGAAAGGTTCATAACCCTGTTGTTGAGCATACTGCCCAGTCAGAAGTTGAATCTGAGGCTCCAAAGCAGCATTTCGCAAAGGTAACAGTTACCTCAGGTCAGGGTGTCTCAGAACCTGGGATCACTCCTGATGAGAagacaaagaaggaaaaggtaACAGTTACCGCAGGTCAGGGTGTTCCAGAACCTGGGCTCACTCCTGATGAGAAgacagagaaggaaaaggtAACAGTTCCCTCAGGTCAGGATATTCCAGAACCTGGGCTCACTTCTGATGAGAagacaaagaaggaaaaggtaACAGTTACCTCAAGTCAGGGTGCTTCAGAATCTGGGGTCACTCCTAAAGAGAAGACTAAGAAGGAAGCAACGTTGACCACATCCAATGTGCCAGATGCAGAAATTACCCCAAGACTTTCGGTTAGTAAAGAGGTATCTGAGATACCAACCAATTATCAAGTGACATTGGATTCAAAGCCCTTGATCGAGAGTACAAATACAGAAAAGAACATCTCTGGTGATGAGGCTATAAATGAGCCTAAAGATCTCCCAGAGAATTTTAAAGATGAGAATTCTCCCTTGACAAATGGAGCCTTGAGTCATAAGGAGGACCTAATGGGCAATGAAAACCAGAAACCCGCCCGGAAAAGTGCCAGTCTCGCAAAGCAGGAACGTGCAGAGAATGGTTTACAGAACAGTCCAACACTACCTAGCTATATGGCAGCAACTGAATCTGCCAAGGCAAAGTTGAGAGCACAAGGGTCCCCAAGGTTTGGACAAGATGGAGTTGAGAGAAACAACCTTGCCCGGCGACATTCTCTGCCATCCTCAACTAACAGCAAAGTTAGTTCGCATTCACCAAGGACGCAGAGACCAGTTCATGCAGGCGGCAAAGGAGGGAACAGAACTGTGCCATCTTCTAGAGATGCCAACgGAAAGGCAATTCAAGCAGAATGGAGAAGGTG 1958 0.429 MGKSPGKWIKHVLFGKKSSKSNFSKEREKHVNEKFVTSKASETGLALDPTPNTIVRNEPNLELEHKEAENISPENQEIDVVEPVHQDDAPLDPEKIRKEEAATKAQAAFRGYLARRAFRALKGIIRLQALIRGHLVRRQAVATFCCMYGIVKLQALVRGGRVRQYVVGFKIHDKCNLVKRQDGKLVNAIGITPKIARLSTNAFICERLASSTTIMALRLQYVPGDPNSVLSWLERWSVSHFWKPVPQPKKIPYSKSHRKQGGNNAVGETLLSKSKRTNRKPSNANFDSVSAQTNTELEKPKRNIRKVSSQQSTDPVQENPQSELEKVKRSLRKVHNPVVEHTAQSEVESEAPKQHFAKVTVTSGQGVSEPGITPDEKTKKEKVTVTAGQGVPEPGLTPDEKTEKEKVTVPSGQDIPEPGLTSDEKTKKEKVTVTSSQGASESGVTPKEKTKKEATLTTSNVPDAEITPRLSVSKEVSEIPTNYQVTLDSKPLIESTNTEKNISGDEAINEPKDLPENFKDENSPLTNGALSHKEDLMGNENQKPARKSASLAKQERAENGLQNSPTLPSYMAATESAKAKLRAQGSPRFGQDGVERNNLARRHSLPSSTNSKVSSHSPRTQRPVHAGGKGGNRTVPSSRDANGKAIQAEWRR 652
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g01247 652 MobiDBLite consensus disorder prediction 306 320 - -
Bva06g01247 652 Gene3D - 95 144 - -
Bva06g01247 652 MobiDBLite consensus disorder prediction 555 571 - -
Bva06g01247 652 MobiDBLite consensus disorder prediction 257 297 - -
Bva06g01247 652 MobiDBLite consensus disorder prediction 490 504 - -
Bva06g01247 652 MobiDBLite consensus disorder prediction 359 469 - -
Bva06g01247 652 MobiDBLite consensus disorder prediction 490 652 - -
Bva06g01247 652 SMART iq_5 97 119 IPR000048 GO:0005515
Bva06g01247 652 SMART iq_5 120 141 IPR000048 GO:0005515
Bva06g01247 652 ProSiteProfiles IQ motif profile. 98 126 IPR000048 GO:0005515
Bva06g01247 652 MobiDBLite consensus disorder prediction 505 519 - -
Bva06g01247 652 ProSiteProfiles IQ motif profile. 122 144 IPR000048 GO:0005515
Bva06g01247 652 Pfam Protein of unknown function (DUF4005) 554 633 IPR025064 -
Bva06g01247 652 Pfam IQ calmodulin-binding motif 100 119 IPR000048 GO:0005515
Bva06g01247 652 Pfam IQ calmodulin-binding motif 122 139 IPR000048 GO:0005515
Bva06g01247 652 PANTHER IQ-DOMAIN 5-RELATED 1 637 - -
Bva06g01247 652 MobiDBLite consensus disorder prediction 247 331 - -
Bva06g01247 652 MobiDBLite consensus disorder prediction 601 621 - -
Bva06g01247 652 PANTHER PROTEIN IQ-DOMAIN 31 1 637 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g01247 Bva-Chr6 9590072 9595229 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g01247 1 652 IQD Protein Family AT1G74690 38.609 4.19e-96 305
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g01247 - - lja:Lj0g3v0315489.1 706.442
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g01247 06 9590072 9595229 Bva05g00456 05 2249559 2254823 ECH
Bva08g01455 08 7616687 7622876 Bva06g01247 06 9590072 9595229 ECH
Bva11g01024 11 11882160 11885324 Bva06g01247 06 9590072 9595229 ECH
Bva06g01247 06 9590072 9595229 Bva06g01247 06 9590072 9595229 ECH