Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g01245 ATGGCGAATTCGCCCCATGGTCCTGCGAGCTTCTGGACTCAGGCAAATGCTCTCCTTAGgaaaaatttaactttccaGAAACGGAACATCGGGACTAATATCAGGCTCATTTTATTCCCATTAGTCTTGTGTTTGTTGCTAGCTATCATTCAAGTTTTAATAGATCGTGAGTTGGATAAGCCTGAAAATAAGTGTGGCTGTACTTGTACTAGAACACAAGGCGGTCAATGTCAAGAACGGGTCTGTGGGATAGAGTACTCAGATGTGGATCAAGCTCCAACTTGTCCAATTCCTAACCCTCCAGAATGGCCTCCATTGTTACAAGTCCCAGCTCCTCAATATCGAGCTGTGCAAACTGATGTTTTCCCATTTTCAGAATTTCCAAATGAGTCCTGCAGGAGGACAGGCTCATGTCCCGTAACTATGCTCTTCACAGGGAATAATCAGACTTTTGGAGAAATTTTATCTGGAAATATGTTCACAAATACCTTTAGTATCAATAATTCTGATATTGTGGGTAGTGTGGCAAGTAATGTCGTGGGATCAGAGTCGGCGACTGAGTTGACCAATTTTCTTGAACCTGCTTTCTTTTCGGGTCTTCCAATCTACAATCTGCAAAACCAGTGCACACAGAACTCTACTATTTCTATTCCTATCCAGCGATCAAATATCACTTCGCCGCAAGAGGTTAGATGTGCTCAAGTTTTAAACATATGGCGCAATAGTTCTTCTGAGGTGAACAATGAGCTCTATCAAGGTTATCGAAGAGCGAACACAGAGAGACAGATCAATGAGATAGTTGCAGCCTATGATTTGCTGGATTCAAATCGgaataatttaaatgtcaGCATATGGTACAACTCAACACAAGCGAATGACACAGGCTTCGGTTCTATTGGTTTGGTGCGGGTTCCCCGTTCTGTGAATCTGGTGTCAAGTGCTTTCCTTCAGTTTCTGCTGGGGCCTGgtacaaaaatgatatttgaatttgtaaaGGAAATGCCAAAACCCGAGACCCCAATCAATTTCGATTTGTCTTCTGTTCTGGGCGCTCTCTTCTTTTCATGGGTCATCCTACAGCTTTTTACGGTCGTCTTGACATCACTGGTATATGAGAAACAAGAGAAACTAAGAATCATGATGAAAATGCACGGTCTTGGTGATGGGCCATATTGGATAATTTCGTATGGTTATTTTCTTGCGGTATCAGCAATCTACATGCTATGTTTTGTGATATTTGGCTCTCTCATAGGATTGAAATTCTTCACATTGAATGACTACAGCATCCAATTCGTGTTTTATTTCATCTATATAAACTTACAAATTTCGCTGGCCTTTCTGTCTGCTTCCATGTTCTCAAATGTTAAGACTGCAACAGTAATTGCAAATATTGGTGTATTTGGAACTGGACTATTGGGTGGCTTCCTTTTCCAATATTTTGTTCAAGATACATCATTTCCTGGAGCCTGGATCGTTGTTATGGAGTTATATCCTGGGTTTGCTTTATATCGTGGGTTATATGAGTTTGCACAATCTTCCTTCAATGGGGATACTTTGGGGACTAACGGGATGCGGTGGGGAGATCTGAATGATAGCACCAATGGCATGAAAGAGGTCTTGATTATCATGTTAGTCGAGTGGGTGATGGTGCTTTTTGTTGCTTATTATGTTGATCAAGTTTTGTCATCAGGAAAAAGTCctctttttttcctaaaagGATTTCAGAGAaagtcttcttcctctttccgGAAGCCCAGTATCCAAAGGCAGGGATCAAAAGTTTTTGTTCAGATGGAGAAACCTGATGTCATTCAGGAGaGAGAGAAGGTTGAGCAGCTGCTGCTTGAACCAACTACTAGTCATGCAATCATATGTGACGACCTTAAAAAGGTCTATCCAGGAAGGGATGGAAACCCAGAAAAGTTTGCCGTGAGAGGCTTGTCTCTTGCTTTGCCTCGAGGGGAATGCTTTGGCATGCTTGGTCCCAATGGCGCTGGGAAGACCTCTTTTATCAATATGATGATTGGTCTGACGAAGCCAACCTCTGGTACTGCATTTGTTCAAGGCCTGGACATAAGAAATGATATGGATGGAATATATACAAGCATGGGTGTATGCCCACAGCATGAcTTGCTGTGGGGAACCCTGACAGGAAGAGAGCACCTACTCTTCTATGGAAgacttaaaaatcttaaaggTTCTGCCTTAACACAAGCAGTGGAAGAGTCTCTGAAAAATGTAAACCTTTTCCATGGAGGAGTTGCTGATAAACAAGCTAAAAAATACAGTGGAGGAATGAAGAGGAGGCTTAGTGTTGCGATTTCATTGATAGGGGACCCCAGTGTTGTTTATATGGATGAGCCAAGCACTGGGTTAGATCCTGCGTCGAGAAAAAGCTTATGGAATGTTGTCAGGCGTGCAAAGCAAGACCGTGCAATCATTCTCACCACACATTCCATGGAAGAGGCAGAGATTTTATGTGATCGATTAGGAATTTTTGTAGATGGAAGCTTGCAGTGCATAGGGAATCCAACGGAGCTGAAAGCCAGATATGGGGGATCTTTTGTGTTTACAATGACAACATCTTCGGATAATGAGAGTGAAGTGGAGAAATTGGTGCGACAGCTCTCCCCAAATGCTAAGAAGGTGTACCATATCTCTGGTACCCAGAAGTTTGAGCTACCAAAAGATGAGATTAGAATTGCAGACGTGTTCCGAACTGTTGGCACTGCAAAAAGCAACTTTCCGGTTTTTGCATGGGGTTTAGTTAACACCACATTGGAAGATGTCTTCATTAAGGTAGCACAAGGAGCTCAAGCGTTCAACACATTATCATA 2837 0.4106 MANSPHGPASFWTQANALLRKNLTFQKRNIGTNIRLILFPLVLCLLLAIIQVLIDRELDKPENKCGCTCTRTQGGQCQERVCGIEYSDVDQAPTCPIPNPPEWPPLLQVPAPQYRAVQTDVFPFSEFPNESCRRTGSCPVTMLFTGNNQTFGEILSGNMFTNTFSINNSDIVGSVASNVVGSESATELTNFLEPAFFSGLPIYNLQNQCTQNSTISIPIQRSNITSPQEVRCAQVLNIWRNSSSEVNNELYQGYRRANTERQINEIVAAYDLLDSNRNNLNVSIWYNSTQANDTGFGSIGLVRVPRSVNLVSSAFLQFLLGPGTKMIFEFVKEMPKPETPINFDLSSVLGALFFSWVILQLFTVVLTSLVYEKQEKLRIMMKMHGLGDGPYWIISYGYFLAVSAIYMLCFVIFGSLIGLKFFTLNDYSIQFVFYFIYINLQISLAFLSASMFSNVKTATVIANIGVFGTGLLGGFLFQYFVQDTSFPGAWIVVMELYPGFALYRGLYEFAQSSFNGDTLGTNGMRWGDLNDSTNGMKEVLIIMLVEWVMVLFVAYYVDQVLSSGKSPLFFLKGFQRKSSSSFRKPSIQRQGSKVFVQMEKPDVIQEREKVEQLLLEPTTSHAIICDDLKKVYPGRDGNPEKFAVRGLSLALPRGECFGMLGPNGAGKTSFINMMIGLTKPTSGTAFVQGLDIRNDMDGIYTSMGVCPQHDLLWGTLTGREHLLFYGRLKNLKGSALTQAVEESLKNVNLFHGGVADKQAKKYSGGMKRRLSVAISLIGDPSVVYMDEPSTGLDPASRKSLWNVVRRAKQDRAIILTTHSMEEAEILCDRLGIFVDGSLQCIGNPTELKARYGGSFVFTMTTSSDNESEVEKLVRQLSPNAKKVYHISGTQKFELPKDEIRIADVFRTVGTAKSNFPVFAWGLVNTTLEDVFIKVAQGAQAFNTLS 945
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g01245 945 ProSitePatterns ABC transporters family signature. 762 776 IPR017871 GO:0005524
Bva06g01245 945 CDD ABC_subfamily_A 623 848 - -
Bva06g01245 945 Pfam ABC transporter 645 789 IPR003439 GO:0005524
Bva06g01245 945 PANTHER ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A ABCA 8 945 IPR026082 GO:0016021|GO:0055085|GO:0140359
Bva06g01245 945 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 623 860 IPR003439 GO:0005524
Bva06g01245 945 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 622 851 IPR027417 -
Bva06g01245 945 Pfam ABC-2 family transporter protein 278 554 - -
Bva06g01245 945 SMART AAA_5 653 836 IPR003593 -
Bva06g01245 945 PANTHER ABC TRANSPORTER A FAMILY PROTEIN 8 945 - -
Bva06g01245 945 Gene3D - 614 888 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g01245 Bva-Chr6 9574976 9581571 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g01245 627 847 Calmodulin-binding Proteins AT2G36910 23.932 4.73e-12 68.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g01245 - - gmx:100805474 1501.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g01245 06 9574976 9581571 Bva06g01245 06 9574976 9581571 ECH