Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g01243 ATGGGGAATTGCTTCGGAGCTCGTTCTCGTTCTAACACTCACCCTACTTCCTCTGCTTCTGATGCAACAAAAGTTTCCAGTACACCATTGCATGGAAGCAGTGACAAATGTAAACTTGAGAGTCTCCGCACTCCAAGATCTGAGGGGTGGATTGATGAGCAAACCCTTGGTGTTGCCAGACCTGGATCTGGAATGGTTGTAGCTGTCAAGAAGTTAAAACCAGAAGGTTTTCAAGGGCATAAAGAGTGGCTGtCCGAAGTCAACTATCTTGGGCAACTTCATCATCCCAATCTTGTCAAACTTATTGGGTACTGCCTTGATGGGGATAACCGCCTTCTAGTATACGAGTACATGTCCAAAGGCAGTTTGGAGAACCATCTATTTCGaaGGGGTGCACAACCACTTCCTTGGGCAACAAGGATCAAAGTTGTCACTGGCGCTGCCCGAGGTCTTGCCTTCCTGCATGAGTCTGAGCAACAAGTTATCTACCGTGATTTCAAGGCTTCTAATGTTTTATTAGATTCGGATTTCAATGCTAAGCTCTCAGACTTTGGTTTGGCGAAAGCAGGGCCCACTGGTGATCATACTCATGTTTCCACACAAGTATTGGGCACTCAAGGTTATGCAGCTCCAGAATATCTTGCCACAGGTCGTCTGACTTCAAGGTGTGATGTATATAGCTTTGGGGTTGTGTTATTGGAAGTGCTAACTGGAAGGCATGCGGttgacaaaacaaaatcaggAATGGAACAGATTCTGGTAGATTGGGCAAGACCGTATTTGGGTGATAGGAGGAAGCTATTTCTCATTATGGACACGAGGTTACGAGGGCAATACCCACACAGGGCAGCTTACACAGCTGCATTGCTTGCATTACAATGTATTAGAGAGGCCAAAGTGAGACCAAACATGTCTGAGGTTTTGGCCACTTTGGAACAGCTCCCAGTTGCCAGACATTCACATTCACCCAGCCCATCCCGCAGCACCACTTCAACTACTCATCCCATGCCAAACTCCTCTTTAACACACAATCATCATCATTCGCCACTTGCATCCCCAGCAGGTTATTCTCACGGGACTTCATATTCTCTTCAAGTGGAAACGTA 1106 0.4584 MGNCFGARSRSNTHPTSSASDATKVSSTPLHGSSDKCKLESLRTPRSEGWIDEQTLGVARPGSGMVVAVKKLKPEGFQGHKEWLSEVNYLGQLHHPNLVKLIGYCLDGDNRLLVYEYMSKGSLENHLFRRGAQPLPWATRIKVVTGAARGLAFLHESEQQVIYRDFKASNVLLDSDFNAKLSDFGLAKAGPTGDHTHVSTQVLGTQGYAAPEYLATGRLTSRCDVYSFGVVLLEVLTGRHAVDKTKSGMEQILVDWARPYLGDRRKLFLIMDTRLRGQYPHRAAYTAALLALQCIREAKVRPNMSEVLATLEQLPVARHSHSPSPSRSTTSTTHPMPNSSLTHNHHHSPLASPAGYSHGTSYSLQVET 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g01243 368 MobiDBLite consensus disorder prediction 1 37 - -
Bva06g01243 368 SUPERFAMILY Protein kinase-like (PK-like) 62 339 IPR011009 -
Bva06g01243 368 Pfam Protein kinase domain 63 247 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva06g01243 368 PANTHER OS01G0588500 PROTEIN-RELATED 48 342 - -
Bva06g01243 368 MobiDBLite consensus disorder prediction 315 368 - -
Bva06g01243 368 ProSiteProfiles Protein kinase domain profile. 1 314 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva06g01243 368 MobiDBLite consensus disorder prediction 317 347 - -
Bva06g01243 368 PANTHER BNAC02G17010D PROTEIN 48 342 - -
Bva06g01243 368 Gene3D Transferase(Phosphotransferase) domain 1 119 330 - -
Bva06g01243 368 MobiDBLite consensus disorder prediction 354 368 - -
Bva06g01243 368 Gene3D Phosphorylase Kinase; domain 1 55 118 - -
Bva06g01243 368 ProSitePatterns Serine/Threonine protein kinases active-site signature. 161 173 IPR008271 GO:0004672|GO:0006468
Bva06g01243 368 MobiDBLite consensus disorder prediction 1 34 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g01243 Bva-Chr6 9566634 9569058 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g01243 46 330 Glycoside Hydrolase AT3G07070 49.834 1.83e-91 278
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Bva06g01243 Pkinase 1.6e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g01243 - - jre:108995487 478.018
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g01243 06 9566634 9569058 Bva05g00458 05 2259026 2261625 ECH
Bva03g01291 03 12587394 12592641 Bva06g01243 06 9566634 9569058 ECH
Bva04g01205 04 8260389 8266771 Bva06g01243 06 9566634 9569058 ECH
Bva06g01243 06 9566634 9569058 Bva06g01243 06 9566634 9569058 ECH