Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g01238 ATGGAGTCTTTCAAGTTCTTGAAAGGGTATGGCAAAGTAGATGGTGATCATCTTGAAGATCAACCTCTCCAGCATCAGCAGCGCAGGGTTAGTCATAAGACCCTCGTCGCTACCATTTCTATTTTCGGCATCCTCTTCCTAACCCTAATCGTCGGTATGATGCTTGGTGCTCTGATCACCGACTCTGAGACCGAGTCACCCCGCACCCAAACCCCATCCAATTCTGCCAACTCGGTCGATTCCATCAAAACCGTTTGCAACGTGACTCGGTTTCCCGCGTCCTGTGTCTCAACCTTATCCTCTTCCCTCAATCCCAGCATCCCCAACGACCCAGAAGCCATTTTCAAGCTCTCTCTTCAGGTCTCCATCGCCGAACTCTCCAAGCTCTCATCTTTCTTCAAAAACACAAACGGGTCAGCTCTGGCAGATTGCAAGGATCAGATAGACGACGCGCTGAGTCGACTCAGTGATTCGGTATCGGCAATGGAGGCGGGTGAGAAAGCATTGACGGATGCGAAGATCAACGACATCCAGACATGGATCAGCGCCGCCGTGACCGACCAGGAGAGTTGCCTGGATGGATTGGAGGAGATGGAGTCAAATGCTATCGGGGAGGTGAAGAGCAAGATGAAGAACTGCAGGGAGTACACCAGTAACAGCTTAGCCATCATTGCACATATTCGTCCCTTGTTAGACCAGTTTCATATGTCTCTCCATTG 719 0.5063 MESFKFLKGYGKVDGDHLEDQPLQHQQRRVSHKTLVATISIFGILFLTLIVGMMLGALITDSETESPRTQTPSNSANSVDSIKTVCNVTRFPASCVSTLSSSLNPSIPNDPEAIFKLSLQVSIAELSKLSSFFKNTNGSALADCKDQIDDALSRLSDSVSAMEAGEKALTDAKINDIQTWISAAVTDQESCLDGLEEMESNAIGEVKSKMKNCREYTSNSLAIIAHIRPLLDQFHMSLH 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g01238 239 PANTHER PECTINESTERASE 1-LIKE 5 234 - -
Bva06g01238 239 TIGRFAM PME_inhib: pectinesterase inhibitor domain 72 227 IPR006501 GO:0004857
Bva06g01238 239 CDD PMEI-like_3 84 227 - -
Bva06g01238 239 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 81 227 IPR035513 -
Bva06g01238 239 Gene3D Invertase/pectin methylesterase inhibitor family protein 76 228 IPR035513 -
Bva06g01238 239 PANTHER PECTINESTERASE 5 234 - -
Bva06g01238 239 Pfam Plant invertase/pectin methylesterase inhibitor 81 223 IPR006501 GO:0004857
Bva06g01238 239 SMART PMEI_2 77 223 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g01238 Bva-Chr6 9536800 9537711 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g01238 1 239 Carbohydrate Esterase AT1G53840 37.209 8.50e-35 129
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g01238 - - jre:108995452 244.202