Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g01234 ATGACCGAGAGAaACCGTGTTCAATTGGCTACGAGGAGCGTCGGATCAGAGGCCAAACATCCATTGGTTTGGTGGGTCAATATGTTAGAAGAGAAATCAGAAAACAGCTCTTGTCCTGGCAAAAAGATCCAAGCAAAAGTCCCCAAAAGGATTCACAAGgctgagagagagaaagtgaagcGTGAGCATTTGAACGAACTCTTTGTAGATCTTGCCAATGCTCTTGAACTGAGTCAGCAGAACAGTGGAAAGGCATCTATACTGTGTGAAGCCACTAGGCTGCTAAAGGACTTGCTTGGTCAGATTGAGTTCCTCAAGAAGGAGAACGAATCTCTGTTATCCGAATCTCATTATGTGAGCATGGAGAAAAATGAGCTGAAGGAGGAAAGTTCTACCCTTGAAACTCAAATTGAGAAGCTTCAAGGTGAGATACAAGCAAGAGTGGCCCAGTCTAAACCTGATCTGAATGTACTTCCTACTTTGGAACCTGAGCCACCAGAGCagacaacaaattttgtgGGAGAAAGGCTCCCGTCAAGTTTAGAACCTACAATGCAGCAAGGGTCCGCATTCTTAGTTGTCCCCTTTCGTCCTCGCCTTCAATCTGCCTTTTCAGCTCCTAATGCTGCTGAGCTCTCGTTGAAGTCTTCCTCTAATATCAGTAAACCACATGCAAGGTATCCCACGCCAGCAGATTCGTGGCCATCACAGCTGCTTGGCGAGCAACCAACTTCGAGTTA 740 0.4392 MTERNRVQLATRSVGSEAKHPLVWWVNMLEEKSENSSCPGKKIQAKVPKRIHKAEREKVKREHLNELFVDLANALELSQQNSGKASILCEATRLLKDLLGQIEFLKKENESLLSESHYVSMEKNELKEESSTLETQIEKLQGEIQARVAQSKPDLNVLPTLEPEPPEQTTNFVGERLPSSLEPTMQQGSAFLVVPFRPRLQSAFSAPNAAELSLKSSSNISKPHARYPTPADSWPSQLLGEQPTSS 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g01234 246 Coils Coil 95 115 - -
Bva06g01234 246 PANTHER TRANSCRIPTION FACTOR BHLH47 20 245 - -
Bva06g01234 246 Gene3D - 45 123 IPR036638 GO:0046983
Bva06g01234 246 PANTHER TRANSCRIPTION FACTOR BHLH47 20 245 - -
Bva06g01234 246 MobiDBLite consensus disorder prediction 207 224 - -
Bva06g01234 246 MobiDBLite consensus disorder prediction 207 246 - -
Bva06g01234 246 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 48 114 IPR036638 GO:0046983
Bva06g01234 246 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 48 98 IPR011598 GO:0046983
Bva06g01234 246 Coils Coil 123 143 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g01234 Bva-Chr6 9523038 9525939 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g01234 35 242 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G47640 53.125 1.84e-66 204
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g01234 - - pvy:116138506 290.041
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g01234 06 9523038 9525939 Bva05g00466 05 2296219 2298899 ECH
Bva06g01234 06 9523038 9525939 Bva06g01234 06 9523038 9525939 ECH