Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g01224 ATGAAGAAGCGACAGGTGGTggtgaaaagaaatatcagTTCCAACACTTCATCGTCAGTGATGAGAAGTATACGATACGGTGAGTGTCAAAAGAATCATGCAGCAAATATTGGAGGGTATGCTGTGGATGGATGCAGGGAGTTTATGGCCAGCGGTGGAGAGGGGACAAGTGGGGCGCTTACATGTGCGGCCTGTGGCTGCCACAGGAATTTTCATCGAAGGGAAGTCCAAACTGAAGTTGTCTGTGAGTATTCTCCTCCTGATTCTGCTCGTTG 275 0.4618 MKKRQVVVKRNISSNTSSSVMRSIRYGECQKNHAANIGGYAVDGCREFMASGGEGTSGALTCAACGCHRNFHRREVQTEVVCEYSPPDSAR 91
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g01224 91 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 26 75 IPR006456 -
Bva06g01224 91 TIGRFAM ZF_HD_prot_N: ZF-HD homeobox protein Cys/His-rich dimerization domain 25 76 IPR006456 -
Bva06g01224 91 Pfam ZF-HD protein dimerisation region 24 76 IPR006456 -
Bva06g01224 91 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 1 88 - -
Bva06g01224 91 PANTHER BNAA09G44460D PROTEIN 1 88 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g01224 Bva-Chr6 9471559 9471834 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g01224 1 89 Zinc finger-homeobox gene family AT1G18835 76.404 5.26e-43 133
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Bva06g01224 ZF-HD_dimer 1.5e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g01224 - - tcc:18604683 166.392