Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g01219 ATGGGGAGTACTCAGCCATTCATGAGTTGGACGTCCAACTATGAAATAGCCAAAGATGAAGACCCTTTTCCACTTGCATACCAATTACCTTCATCTGATTTCAGTGGAAATATTGGTAACGGATATTTTACTGTGGATTGGACATATGAATTTTCCATGCAAGACAACATTTCTGATGTTTTCCCTTTGATGGGGAGTTTCCCTGACCCGTATGAAACACTCTCCATTGAACCAACTTCGAGCTTAAAAGTTGCAGACGACGACTTCTGTGCTATCAAAAATGGATGTGCTGTTTGGAATGAAAACGACGTTGCGTTTGATTCTGATCAACAACCGTTGTTGTTATGCAAAAATggggaaaatggaaaagaaatgcAGGAAGATAGGAAGGAGAAGCGATGCAGAAAGGAGAGAATGGGCAGCACGATAATGTTGTCAAGGAAGACCATTTCTGAGTATTTCTACATGCCAATCACACGAGCCGCTAAGGAGCTTAATGTAGGCCTCACACTCTTGAAGAAGAGGTATTCATTTCCTAGTAGAAAAACAAAGGATGCATTTTTCGATTTTCTTAATGCTTTGGTGGCATTGATTATTTTCAAGTCACGAAGCCTTATGCACAATGGATTGAGGTTCCAGGAGCTAGGAATGCAGGAAGGGCAGGAAAGTGAAGCAAAGTTAAGGAATGCAATTGAGATattagagaaggaaaagaagctTTTGGAAGAGAAGCCAGATTTGCAACTGGAGGACTATACCAAGAGGCTTAGGCAAGCATGCTTTAAGGCCAACTACAAGAAGAGGAAGCTCATGGGAATGCATATGGGATCCATGGACTTGCTGCAATGTTCTCTCTGTGCCCATGAAAGAAGGGATGAATTTGAAGATGGATGtattaatgatgaaaatgagcAGCACGACATCAATTCTCTGTTGCCCGACGCTCGTTCTTATTG 956 0.3944 MGSTQPFMSWTSNYEIAKDEDPFPLAYQLPSSDFSGNIGNGYFTVDWTYEFSMQDNISDVFPLMGSFPDPYETLSIEPTSSLKVADDDFCAIKNGCAVWNENDVAFDSDQQPLLLCKNGENGKEMQEDRKEKRCRKERMGSTIMLSRKTISEYFYMPITRAAKELNVGLTLLKKRYSFPSRKTKDAFFDFLNALVALIIFKSRSLMHNGLRFQELGMQEGQESEAKLRNAIEILEKEKKLLEEKPDLQLEDYTKRLRQACFKANYKKRKLMGMHMGSMDLLQCSLCAHERRDEFEDGCINDENEQHDINSLLPDARSY 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g01219 318 Pfam RWP-RK domain 145 175 IPR003035 -
Bva06g01219 318 PANTHER PROTEIN RKD1-RELATED 47 175 - -
Bva06g01219 318 PANTHER PROTEIN RKD1-RELATED 213 280 - -
Bva06g01219 318 PANTHER PROTEIN RKD4 47 175 IPR044607 GO:0003700
Bva06g01219 318 PANTHER PROTEIN RKD4 213 280 IPR044607 GO:0003700
Bva06g01219 318 Coils Coil 217 244 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g01219 Bva-Chr6 9449628 9450866 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g01219 1 270 AtRKD Transcription Factor Family AT5G66990 34.564 1.35e-33 123
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF RWP-RK Bva06g01219 RWP-RK 5.5e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g01219 - - qlo:115964427 214.542
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g00482 05 2375531 2376746 Bva06g01219 06 9449628 9450866 BWGD
Bva06g01219 06 9449628 9450866 Bva06g01219 06 9449628 9450866 ECH