Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g01206 ATGGAAAACGTTTCAGTACTGAGTAAGAAAGACGATCAATTGGATTTGCCCCCTGGATTTCGGTTTCACCCAACTGATGAGGAGCTTATAAGCCATTATCTGTACAAGAAGGTGATTGATACCAACTTCTCTGCTAGAGCCATTGGAGAGGTGGACCTGAACAAGTCTGAGCCATGGGATTTGCCATGGAAAGCGAAAATGGGAGAAAAAGAGTGGTACTTCTTCTGCGTGAGAGACAGAAAATACCCAACTGGTTTAAGAACCAACAGAGCTACTGAAGCTGGATACTGGAAGGCCACCGGAAAAGACAAGGAGATTTACAGAGGGAAATCCCTGGTTGGAATGAAGAAGACTTTGGTTTTCTACAGAGGCAGAGCACCCAAAGGAGAGAAAACCAACTGGGTCATGCACGAATACAGACTAGAGGGTAAATTTTCTGTCTACAACCTCCCCAAAACTGCAAAGAATGAGTGGGTGATTTGCAGGGTGTTTCAAAAGAATTCGGGTGGCAAGAAAACCCATATCTCTGGGATAATGAGTTTGGATTCTTTTGGAAATGAATTGGGTTCTTCTGTTCTACCAGCACTGACGGATTCTTCTCCTTACATTGCCAAAACCAGACCTCTGAATGAATCGGCTTACGTGCCCTGCTTCTCCAATCAAATTGATATACAAAGAAACCAAGTTGGGATCTTTGATTCCTTCACCAACACCCTTTTTGGGGTTTCTTCAAATCCTTCAGACATTCTCCCAAGAAACCAACTTTCCACTTCACTCTATTCAACTCAAACTGTTCAAGCTCCTGCAAGTTTTCAACTAGCCGGTTCTGTTCACAATTTGCAGGACCAGTCCATCCTTAGAGCCTTACTCGTAAACCACCACGGATCAAACTTGAGCAACAGTTTCAAAACAGAGAGGGAAATGGTCAGTGTCACACAGTCACAGGAAACAGGCCTCACTACTGACATGAACACCGAGATCTCTTCCGTGgtgtcaaattttgaaatgggAAGGAGGCCCTTTGATAATCAGCACCACCCACCTGCTTCAGCTGCACCAATGGACCTTGATACTATGTGGAATtacta 1088 0.4347 MENVSVLSKKDDQLDLPPGFRFHPTDEELISHYLYKKVIDTNFSARAIGEVDLNKSEPWDLPWKAKMGEKEWYFFCVRDRKYPTGLRTNRATEAGYWKATGKDKEIYRGKSLVGMKKTLVFYRGRAPKGEKTNWVMHEYRLEGKFSVYNLPKTAKNEWVICRVFQKNSGGKKTHISGIMSLDSFGNELGSSVLPALTDSSPYIAKTRPLNESAYVPCFSNQIDIQRNQVGIFDSFTNTLFGVSSNPSDILPRNQLSTSLYSTQTVQAPASFQLAGSVHNLQDQSILRALLVNHHGSNLSNSFKTEREMVSVTQSQETGLTTDMNTEISSVVSNFEMGRRPFDNQHHPPASAAPMDLDTMWNY 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g01206 362 MobiDBLite consensus disorder prediction 338 357 - -
Bva06g01206 362 PANTHER NAC DOMAIN-CONTAINING PROTEIN 100 7 359 - -
Bva06g01206 362 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 7 359 - -
Bva06g01206 362 Gene3D NAC domain 25 170 IPR036093 GO:0003677|GO:0006355
Bva06g01206 362 Pfam No apical meristem (NAM) protein 17 141 IPR003441 GO:0003677|GO:0006355
Bva06g01206 362 ProSiteProfiles NAC domain profile. 16 166 IPR003441 GO:0003677|GO:0006355
Bva06g01206 362 SUPERFAMILY NAC domain 12 166 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g01206 Bva-Chr6 9390237 9392372 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g01206 14 362 NAC Transcription Factor Family AT5G07680 60.114 3.90e-139 396
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Bva06g01206 NAM 1.2e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g01206 - - gmx:100798002 571.622
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g01206 06 9390237 9392372 Bva05g00497 05 2433634 2435590 ECH
Bva06g01206 06 9390237 9392372 Bva06g01206 06 9390237 9392372 ECH