Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g01201 ATGGAAACTGCGGAATATGAAGGAATTCAGAGATTTCGCTCCGTTTCAAAACTCATCCTTTGCGCCCTTTCTGGAGCTCTGACGGGATGTTTTGCCATTGCTGGAGCCTTCACAGGAGCTATTGCTGGTGCTTTAGCGGGTAGAGTTTCTGAGAGTGGTTTTCTCCGAGGAGCTTCATTGGGTGCCATTGCTGGGGCCATTCTCTCTGTTGAGGTGTTGGAGGCTTCCCGTGCCTACTGGTGTATGGAGCAAACGGGCTCTCGAGGCTCATCATCTATGGCAGATTTCATAGAGGAACTTGTTCGTGGGAGGCTTGTAGAGGAACCATTTAGACCAGCTGTGTTAACAGCTTATAGTTGGCAGATTCAGCAGGTTGACATTGCTAATGTAAGATATGATGACATTCGCGACGCTCATAGCTTAGTAGCATCGAGAGGATTGTCAGGGGATTCGTTGAAGAAACTACCACACCATGTGATCTTGAAGGAAATGAAGGCAGAGAACAGTATCTGTTGTATAATATGTTTGCAGGATATTGAAGTAGGAGAAATTGCAAGGAGCTTACCTCGTTGTCACCATACTTTTCACATGACGTGTGTGGACAAGTGGCTTATCAAGAATGATTCATGTCCTATATGTAGACGGAAAgttta 653 0.4548 METAEYEGIQRFRSVSKLILCALSGALTGCFAIAGAFTGAIAGALAGRVSESGFLRGASLGAIAGAILSVEVLEASRAYWCMEQTGSRGSSSMADFIEELVRGRLVEEPFRPAVLTAYSWQIQQVDIANVRYDDIRDAHSLVASRGLSGDSLKKLPHHVILKEMKAENSICCIICLQDIEVGEIARSLPRCHHTFHMTCVDKWLIKNDSCPICRRKV 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g01201 217 SUPERFAMILY RING/U-box 159 217 - -
Bva06g01201 217 Pfam Ring finger domain 172 214 IPR001841 -
Bva06g01201 217 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 133 217 IPR013083 -
Bva06g01201 217 SMART ring_2 172 213 IPR001841 -
Bva06g01201 217 ProSiteProfiles Zinc finger RING-type profile. 172 214 IPR001841 -
Bva06g01201 217 PANTHER NEP1-INTERACTING PROTEIN-LIKE 2 3 216 - -
Bva06g01201 217 PANTHER NEP1-INTERACTING PROTEIN-LIKE 2 3 216 IPR044523 -
Bva06g01201 217 CDD mRING-H2-C3H2C2D_ZSWM2 171 214 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g01201 Bva-Chr6 9362990 9365398 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g01201 14 217 C3H Transcription Factor Family AT1G74410 58.824 2.68e-78 233
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g01201 06 9362990 9365398 Bva06g01201 06 9362990 9365398 ECH