Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g01190 ATGGCGCTGTTCAGAAGGTTCTTTTACCGGAAGCCGCCGGATCGGCTTCTCGAGATCTTCGAGAGGGTCTACgTTTTTGATTGTTGCTTCTCCACGGATGTCTTGGAAGAAGATGAGTACAAAGTTTATTTGGGGGGCATCGTAGCTCAGCTACAAGATCACTTTCCTGATGCTTCTTTCATGGTGTTCAACTTCAGAGAAGGGGATAGACGCAGCCAAATTTCAGACATACTGACTCAGTATGACATGACAGTTATGGAATATCCTCGGCAATACGAGGGTTGTCCACTCCTGCCTTTGGAGATGATCCATCACTTCCTTCGATCGAGTGAAAGCTGGTTATCTTTGGAGGGGCAACAGAATGTGCTTTTGATGCATTGTGAAAGGGGAGGTTGGCCTGTACTTGCATTTATGCTAGCAGGTCTTCTATTGTTTCGGAAACAGTACAGTGGGGAGCAGAAAACTCTTGAAATGGTCTACAAGCAAGCTCCCAAAGAACTTCTCCATCTTTTATCTCCCTTAAACCCACAACCTTCTCAATTAAGATATCTTCAGTACATTTCAAGAAGAAATATGGGTTCTGAGTGGCCTCCACCAGAAACACCTTTATATTTAGATTGTCTGATTCTCAGAGTCCTTCCACTATTTGATGGAGGAAAAGGTTGCCGGCCTGTTGTACGTGTTTACAGTCAGGACCCTTCAAAACGAGTCAATAGAAGTTCTAAGCTTCtattttcaacttcaaagACCAAACAGCATGTTCACCACTATGCACAGGCAGAATGTATGCTCGTGAAAATTGATATCCATTGTCGTGTTCAAGGGGATGTAGTTCTTGAGTGTATACATTTGGACGAAGATTCTGTTCACGAGGAAATGATGTTCAGACTTATGTTCCACACAGCATTTGTGCGGTCAAATATATTGATCCTCAGCCGTGATGAGGTTGATATTTTGTGGGATGCCAAAGATCATTTCCCCAAAGACTTTAAGGCAGAGGTGCTATTTTTGGATGCTGATGCTGTTATACCTACTCTAACCACAGTCACAGTGAGTCAAGatgcaaatgaaaatgaggCAGGAAGTGCTTCACCTGAGGAATTCTATGAGGTGGAAGAGATCTTCAGCAACGTAGTTGATGCACAGGAAGGTAAGGAGGAGTATCATTCTAGTGTGGTTCATGACAATGTAGTAGATGatataaatgataaagaaGTCTGGAAAGAGGATTTGGATCCTCCCAGTTTTCAGGATTGTGCAGCAGATGGTTTGATTAACAAACTGGCCACGACGATGGATTCTGGCTGTAATGCTGTGAAGGACATTGCTGTTGATGATGTGAAGTACAAGCTGGATGAGGGGGTGGATTCTGATCCTCATGCAGTAAAAGACATTTCTGTGGATGATGGAGATATTAAGTCAACCTCCACAGTAGTCACTGCTGATGTGATGGAAACtgtgaaaacaaagaaagtcaCTGTATATGAGCATGAAATATTGGCGGATGTGGTAAAGAAATACGATGAAGATGACAATATAACACAGAAGAAATTAGACTCCAAGGCAGGGGAGCAGAAGCCTGATCTTCCCAGACAAAAATCTGACAAATTACTTCCTTTTGCCCCAAGGAAACAACCTTCAGCAAACACAAAGCCAGTGGTGGAGACATTTGCAGCAAAGCAAAAGATTAAGCAGCAAGAATCGCAAGTTGGTCATGCAAAACAAGCAAAGCCAAATGCAGTGACTAGGTGGATTCCTTCTAACAAGGGTTCCTACACAAATTCGATGCATGTCTATTATCCACCATCATCTCTTGTAAATGCTACTGCTCCAAAGGAGAAAATTATAGATGTCAAATCAAGGTCTGCTTCCACCCCTGACATGATAGATGAACTTAAAAGTCATAAGGTGGATGCTTCAAAATCTTCAGATTCCATACCAGAAACAGACACAAACTGCTCACCATCATTGTTGCCGTCAGTTGAAGATACATATCTTCAAAGAGAAACTCCAACGCCACAACTGAGTCCACAGAAGGTGTTAAGGCCTCCTCCCccacctcctcctcctcctcctccttaTAGTAGAAACTCTTCTTTACATGCTTTTGCACCCTTGTTGTCACAAGATGAGACATTACCTCCATCTTCTCCATCCTCATTATTATCACCATCTTCTTTGGGTGGAAAGGTATCTGCCCTACCACCACCTCCTCCTCTGCCACCACCAGCAACTATAGCATCAATTACTGGACAAAGCATGGGGATGGATTTCAGCTCAGCAACTTCTCCGCCACCACCATCGCCAGCCCCTCCTCCATCCCCATTTGTTGGGCAAAATAGAAACAGCTTTTTAACTCCTCCTCCACCTTCTTGGAAGTCTGTTCATTCATCAATTACTACTGTTGAAGAGGCTAGCGCTCCACCTCCTCCTTCTTTCACAAGTGGATCAATGACATTAGAAGTCTCTAGAATGCCTAGCAGAACTGCATGTCCTtctcctccaccaccaccacctcccCCTCCTCCCTTTACTTCCACTTATAGGGCTCCATCTTTTCCACCTCTACCACCAGCTCCTCCCCCTCCACCACCCTTGCATATGTCATGTGTAGCTTCACCTCTACCCCCGCCCccacctccacctccaccACCCCCACCTCCACCCCCTCTTAGTACAGCTCCACCACCCCCACCTCCACCCCCTTTTAGTAAAGCTCCACCACCCCCACCTCCACCCCCTTTTAGTAAAGCACCACCACCCCCACCTCCACCCTCTTTTAGTAAAGCACCACCACCCCCACCTCCACCTTCACTTCCTCTTAGGGGAGCTCCGCCACCCCCGCCTCCACCTCCTTTCAGCAGGGCTCCACCGcctccacctccacctccTTTTAGCGGAGCTCCACCACCCCCACCTCCACCTCCAATGCATAGAGGTCCACCTCCCCCACCACCACCTCCTTTAACTTCTGGAGCCCCACCTCCTCCACCTCCACCAATTCGTGGACCACCACCTCCCCCGCCACCTCTTGGAGGTCGAGGCCCACCTCCCCCACCCCCACCAGCCCATGGGGCACCGCCTCCACCTCCTCCTCCTGGAGGAAGTGCTCCAGCTCCTCCGAGACTTCCAAGTGGTGCACCTCCACCACCTCCGCCTTTAGGTTCCAAAGGAGCAAATGTTGCAGCTGATCCAAGAGGCAGAGGGCGTGGATTTTCTCGTCCTGGGGCTAGTGCTACAGCACCCCGACGGTCCTCATTAAAGCCTCTGCATTGGAGTAAAGTGACAAGGGCATTGCAAGGAAGTTTGTGGGAAGAATTACAAAGACATGGAGAACCTCAAATTGCACcagaatttgatttttcagaGATAGAGACCCTCTTCTCTGCAAATGTTCCGAAACCTGCTGATGCTGGTGGAAAATCTGGAGGGCGGCGCAAATCTGTTGGGTCTAAACCTGACAAAGTCCACTTGATTGACCTGAGAAGGGCTAATAATACTGAAATTATGCTGACAAAGGTTAAAATGCCTCTTTCGGATATGATGGCTGCAGTACTAGCAATGGATGAGTCCGTATTAGATGTTGATCAAGTGGagaatcttataaaattttgtcctaCCAAAGAGGAGATGGAACTTTTGAAGGGATATACTGGTGACAAGGAGAATTTGGGGAAGTGCGAACAGTATTTTTTGGAGCTGATGAAAGTTCCACGGGTGGAGTCAAAATTAAGAGTATTTTCCTTCAAGATCCAGTTTGGTTCTCAGATTATAGAATTTAAGAAGAGTTTGACCACTGTAAACTCAGCCTGTGAAGAGGTTCGAAAATCAGTCAAACTGAAGGAGattatgaagaaaattctGTATTTAGGGAATACATTGAATCAAGGAACGGCAAGGGGAGCTGCTATTGGATTCAAGTTGGATAGTCTTTTAAAGCTCACTGACACCCGTGCTTCAAACAGTAAGATGACATTGATGCATTATCTTTGCAAGGTCCTAGCGGACAAGTCACCTGGACTCCTTGATTTTCACAAGGACCTTGTTAGCCTGGAAGCTGCTTCTAAGATACAATTGAAGTCACTAGCAGAAGAAATGCAGGCAATCATTAAGGGATTAGAAAAAGTCAAACAAGAACTTGCTGCATCCGAAAATGATGGCCCTGTATCTGAAGTTTTCCGTAAGACATTGAAAGGATTCGTTGCTGTTGCTGAGTCAGAGGTGGCATCTGTAACAAACCTATATTCTGTGGTGGGTAGAAATGCAGATGCACTTGCGCTATATTTCGGTGAGGATCCTGCCCGCTTCCCATTTGAGCAAGTTACCGCAactctcttaaattttataaggttGTTTCGGAAAGCACACGAGGAGAATTGCAAACAAGCAGAgatagagaagaagaaagctgaGAAAGAGGCTGAAATGGAAAAGGCTAAGGGCGTTAATCTGACAAAGAAGAGTCCAAAAGATGGATA 4478 0.4372 MALFRRFFYRKPPDRLLEIFERVYVFDCCFSTDVLEEDEYKVYLGGIVAQLQDHFPDASFMVFNFREGDRRSQISDILTQYDMTVMEYPRQYEGCPLLPLEMIHHFLRSSESWLSLEGQQNVLLMHCERGGWPVLAFMLAGLLLFRKQYSGEQKTLEMVYKQAPKELLHLLSPLNPQPSQLRYLQYISRRNMGSEWPPPETPLYLDCLILRVLPLFDGGKGCRPVVRVYSQDPSKRVNRSSKLLFSTSKTKQHVHHYAQAECMLVKIDIHCRVQGDVVLECIHLDEDSVHEEMMFRLMFHTAFVRSNILILSRDEVDILWDAKDHFPKDFKAEVLFLDADAVIPTLTTVTVSQDANENEAGSASPEEFYEVEEIFSNVVDAQEGKEEYHSSVVHDNVVDDINDKEVWKEDLDPPSFQDCAADGLINKLATTMDSGCNAVKDIAVDDVKYKLDEGVDSDPHAVKDISVDDGDIKSTSTVVTADVMETVKTKKVTVYEHEILADVVKKYDEDDNITQKKLDSKAGEQKPDLPRQKSDKLLPFAPRKQPSANTKPVVETFAAKQKIKQQESQVGHAKQAKPNAVTRWIPSNKGSYTNSMHVYYPPSSLVNATAPKEKIIDVKSRSASTPDMIDELKSHKVDASKSSDSIPETDTNCSPSLLPSVEDTYLQRETPTPQLSPQKVLRPPPPPPPPPPPYSRNSSLHAFAPLLSQDETLPPSSPSSLLSPSSLGGKVSALPPPPPLPPPATIASITGQSMGMDFSSATSPPPPSPAPPPSPFVGQNRNSFLTPPPPSWKSVHSSITTVEEASAPPPPSFTSGSMTLEVSRMPSRTACPSPPPPPPPPPPFTSTYRAPSFPPLPPAPPPPPPLHMSCVASPLPPPPPPPPPPPPPPPLSTAPPPPPPPPFSKAPPPPPPPPFSKAPPPPPPPSFSKAPPPPPPPSLPLRGAPPPPPPPPFSRAPPPPPPPPFSGAPPPPPPPPMHRGPPPPPPPPLTSGAPPPPPPPIRGPPPPPPPLGGRGPPPPPPPAHGAPPPPPPPGGSAPAPPRLPSGAPPPPPPLGSKGANVAADPRGRGRGFSRPGASATAPRRSSLKPLHWSKVTRALQGSLWEELQRHGEPQIAPEFDFSEIETLFSANVPKPADAGGKSGGRRKSVGSKPDKVHLIDLRRANNTEIMLTKVKMPLSDMMAAVLAMDESVLDVDQVENLIKFCPTKEEMELLKGYTGDKENLGKCEQYFLELMKVPRVESKLRVFSFKIQFGSQIIEFKKSLTTVNSACEEVRKSVKLKEIMKKILYLGNTLNQGTARGAAIGFKLDSLLKLTDTRASNSKMTLMHYLCKVLADKSPGLLDFHKDLVSLEAASKIQLKSLAEEMQAIIKGLEKVKQELAASENDGPVSEVFRKTLKGFVAVAESEVASVTNLYSVVGRNADALALYFGEDPARFPFEQVTATLLNFIRLFRKAHEENCKQAEIEKKKAEKEAEMEKAKGVNLTKKSPKDG 1492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g01190 1492 SMART PTEN_C2_2 198 338 IPR014020 -
Bva06g01190 1492 Coils Coil 1359 1386 - -
Bva06g01190 1492 MobiDBLite consensus disorder prediction 516 551 - -
Bva06g01190 1492 MobiDBLite consensus disorder prediction 777 826 - -
Bva06g01190 1492 SMART it6_source 622 1491 IPR015425 -
Bva06g01190 1492 MobiDBLite consensus disorder prediction 1469 1492 - -
Bva06g01190 1492 MobiDBLite consensus disorder prediction 829 1056 - -
Bva06g01190 1492 CDD PTP_PTEN-like 16 190 - -
Bva06g01190 1492 Gene3D - 205 336 - -
Bva06g01190 1492 Pfam C2 domain of PTEN tumour-suppressor protein 199 336 IPR014020 -
Bva06g01190 1492 MobiDBLite consensus disorder prediction 701 727 - -
Bva06g01190 1492 MobiDBLite consensus disorder prediction 731 745 - -
Bva06g01190 1492 Gene3D Formin, FH2 domain 1077 1464 IPR042201 -
Bva06g01190 1492 Pfam Formin Homology 2 Domain 1082 1452 IPR015425 -
Bva06g01190 1492 MobiDBLite consensus disorder prediction 644 676 - -
Bva06g01190 1492 MobiDBLite consensus disorder prediction 746 761 - -
Bva06g01190 1492 MobiDBLite consensus disorder prediction 516 533 - -
Bva06g01190 1492 ProSiteProfiles Formin homology-2 (FH2) domain profile. 1077 1478 IPR015425 -
Bva06g01190 1492 SUPERFAMILY Formin homology 2 domain (FH2 domain) 1153 1480 - -
Bva06g01190 1492 MobiDBLite consensus disorder prediction 677 696 - -
Bva06g01190 1492 ProSiteProfiles C2 tensin-type domain profile. 200 339 IPR014020 -
Bva06g01190 1492 Gene3D Protein tyrosine phosphatase superfamily 14 204 IPR029021 -
Bva06g01190 1492 MobiDBLite consensus disorder prediction 617 643 - -
Bva06g01190 1492 Coils Coil 1453 1487 - -
Bva06g01190 1492 MobiDBLite consensus disorder prediction 1132 1153 - -
Bva06g01190 1492 PANTHER FORMIN-J 1 1486 - -
Bva06g01190 1492 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 199 336 IPR035892 -
Bva06g01190 1492 MobiDBLite consensus disorder prediction 762 776 - -
Bva06g01190 1492 MobiDBLite consensus disorder prediction 617 1085 - -
Bva06g01190 1492 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 13 188 IPR029021 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g01190 Bva-Chr6 9313599 9323824 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g01190 1054 1487 FH2 protein (formin) Gene Family AT5G07740 82.569 0.0 725
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g01190 06 9313599 9323824 Bva06g01190 06 9313599 9323824 ECH