Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g01189 ATGGGCTGTGTCAGTTCGAAGCAAGCGGTGTCTGTTACCCCTGCTAACGATCACTCGGGTGCGTTTCGGGGCAATGCGGGTACAGGCAATTCGGGGAGGAACTTGGGTGAGTCagataagaagaagaagaagagtgaGTCACTGAGTAGGAGCGAGGTGGGTGAGTCGGGGAGGACGAGTTCAAATGGGGATTGTGACTCTTTAGGCTTGAGACTGGGGAATCTGCACAAGTATGTAGAGGGAGAGCAGGTAGCGGCAGGCTGGCCGGCTTGGCTTGGCACCGTCGCCGCTGAAGCCATTCAAGGTTGGGTGCCCCTTCGAGCTGATGCCTTTGAGAAATTGGAAAAGATTGGACAGGGCACATACAGCAGTGTCTTCCGAGCACGAAACCTCGAGACTGGGAAGATAGTGGCACTGAAGAAGGTGCGGTTTGACAATTTTGAGCCAGAAAGTGTTAGGTTTATGGCACGAGAAATAATGATTCTCAGAAGGCTTGATCACCCAAACATTATCAAATTGGAGGGCTTGATTACTTCCAAATTGTCTTGCAGCATATACCTTGTATTCGAGTACATGGAACATGACATTACAGGGCTCTTGTCTTGCCCTGATATCAAGTTTAGTGAAGCACAGATCAAATGCTACATGAAACAGTTGCTATCTGGACTTGAGCATTGTCACTCACGGGGTGTAATGCATCGGGACATCAAAGGATCAAATCTTCTGGTAAATAACGAAGGGATACTAAAGGTGGCTGATTTTGGATTggcaaacttctctaattctGGGAACCACCAGCCCCTCACCAGTCGCGTCGTCACATTATGGTACCGGCCTCCTGAACTTCTGCTGGGTGCAACAGATTATGGTCCCTCTGTAGATCTCTGGAGCATTGGCTGTGTATTTGCAGAACTACTTGTTGGGAAGCCCATCCTCCAGGGAAGAACAGAGGTTGAACAATTGCACAAAATCTTCAAGCTTTGTGGCTCACCACCCGATGATTACTGGAAGAAGACCAGACTTCCTCATGCAACTTTGTTTAAGCCACAGCAACCATATGATAGTTGTCTGCAAGAGACCTTTAAAGATTTGCCCGCAGCCAACGTGAATCTGATACGAACTCTACTTTCCATTGAACCATACAAACGTGGGACTGCTTCATCTGTCCTCTCTTCGGAGTATTTCAAAACTAAGCCTTACGCATGTGATCCATCAAGCTTGCCGGTGTACCAACCAAGCAAGGAGATTGATGCAAAACATCGAGAGGAGTCAAGGAGGAAAAAGATTGGTGGAAGAACTAGTAGACCTGAAACGAGAAAACCATCAAGAAAGCCACTAGGATTCAGTAAATTAGCCCCAGCAGAGGATTTGGCTATTCAAACTTACAAATCACGCAAGGTCAATGGTAGATCTGTCTCCATCCTTAAAGAAAACACCAACGTTGTTGAGGACACACCAAAGACATCTACTGGTAAATCAGAAGATACTTCTCATACAAAGAAAGCATCTCACGGAGACATTCCCTATTCTGGACCATTACAAGTTTCCACATCAAGTGGCTTTGCATGGGCAAAAAGGCGTAAAGATGACCACACCATAAAATCCCATTCTCGATCTATTTCAAGAGGTTCCAATACATTAGAACCTTCTGCACTAAATTCAAGGAACAATTTTGACTCCAAGAACCATGAAAATAAGGAATTTTGCGGGGGGCGTTCCAACTCTAGGGGCCATGACCTGCATGAATTTTCAAAGCTTGTCATGCAGAATCATTGGAGCAAGTTTGATCGCCCAGATTCATTTGATGCCTCTGATGAATACCACTCACAAGAACTATCTATGGGACTTTATCAAAGGGAAGACACAGCTTCTAAAAGAAGTAACCTGAGTTATCAGGATCAAGGAGAAAAGGTTGAATTTTCAGGACCCCTACTATCTCAAATGCATACAGTTGACGAGCTCTTAGAACGCCACGAACGTCACATTCGCCGTACAGTCAGAAGAACCTGGTTTCAGAGAGGTAAGAAGCATGGGAAGTG 2039 0.4492 MGCVSSKQAVSVTPANDHSGAFRGNAGTGNSGRNLGESDKKKKKSESLSRSEVGESGRTSSNGDCDSLGLRLGNLHKYVEGEQVAAGWPAWLGTVAAEAIQGWVPLRADAFEKLEKIGQGTYSSVFRARNLETGKIVALKKVRFDNFEPESVRFMAREIMILRRLDHPNIIKLEGLITSKLSCSIYLVFEYMEHDITGLLSCPDIKFSEAQIKCYMKQLLSGLEHCHSRGVMHRDIKGSNLLVNNEGILKVADFGLANFSNSGNHQPLTSRVVTLWYRPPELLLGATDYGPSVDLWSIGCVFAELLVGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKTRLPHATLFKPQQPYDSCLQETFKDLPAANVNLIRTLLSIEPYKRGTASSVLSSEYFKTKPYACDPSSLPVYQPSKEIDAKHREESRRKKIGGRTSRPETRKPSRKPLGFSKLAPAEDLAIQTYKSRKVNGRSVSILKENTNVVEDTPKTSTGKSEDTSHTKKASHGDIPYSGPLQVSTSSGFAWAKRRKDDHTIKSHSRSISRGSNTLEPSALNSRNNFDSKNHENKEFCGGRSNSRGHDLHEFSKLVMQNHWSKFDRPDSFDASDEYHSQELSMGLYQREDTASKRSNLSYQDQGEKVEFSGPLLSQMHTVDELLERHERHIRRTVRRTWFQRGKKHGK 679
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g01189 679 Gene3D Transferase(Phosphotransferase) domain 1 194 434 - -
Bva06g01189 679 ProSitePatterns Protein kinases ATP-binding region signature. 117 140 IPR017441 GO:0005524
Bva06g01189 679 Pfam Protein kinase domain 111 395 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva06g01189 679 PANTHER BINDING PROTEIN, PUTATIVE-RELATED 1 672 - -
Bva06g01189 679 MobiDBLite consensus disorder prediction 478 575 - -
Bva06g01189 679 MobiDBLite consensus disorder prediction 523 537 - -
Bva06g01189 679 MobiDBLite consensus disorder prediction 406 449 - -
Bva06g01189 679 MobiDBLite consensus disorder prediction 1 15 - -
Bva06g01189 679 CDD STKc_CDK9_like 111 395 - -
Bva06g01189 679 MobiDBLite consensus disorder prediction 1 63 - -
Bva06g01189 679 SUPERFAMILY Protein kinase-like (PK-like) 105 402 IPR011009 -
Bva06g01189 679 SMART serkin_6 111 395 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva06g01189 679 Gene3D Phosphorylase Kinase; domain 1 98 193 - -
Bva06g01189 679 PANTHER CELL DIVISION PROTEIN KINASE 1 672 - -
Bva06g01189 679 ProSiteProfiles Protein kinase domain profile. 111 395 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva06g01189 679 MobiDBLite consensus disorder prediction 488 502 - -
Bva06g01189 679 MobiDBLite consensus disorder prediction 538 558 - -
Bva06g01189 679 MobiDBLite consensus disorder prediction 559 575 - -
Bva06g01189 679 MobiDBLite consensus disorder prediction 35 51 - -
Bva06g01189 679 ProSitePatterns Serine/Threonine protein kinases active-site signature. 231 243 IPR008271 GO:0004672|GO:0006468
Bva06g01189 679 MobiDBLite consensus disorder prediction 414 444 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g01189 Bva-Chr6 9304234 9308906 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g01189 103 455 Core Cell Cycle Gene Families AT5G10270 47.425 1.56e-110 341
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Bva06g01189 Pkinase 2.3e-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g01189 - - gmx:100803328 1087.79
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g01189 06 9304234 9308906 Bva05g00512 05 2510563 2515183 ECH
Bva06g01189 06 9304234 9308906 Bva06g01189 06 9304234 9308906 ECH