Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g01184 ATGTCAGAACAGGAAACTGATTCCTGGGTCTTCCTATTATTCTGTTCCTTAATCCTTTTTACAGGTAATATTGTTGCCGGGGAGTCTCTGGACACAGACACAGCAGTTCTGGTCAGGCTGAAAAGTTACCTCGACAATCAAACTCTGGCAGACAGGGGAAGATATATAGAGTGGGACAAGAACAGCACCAATCCTTGTCAATGGTCAGGAATCTCGTGCAGCTTCATTGGAACAACATTGAGGGTAGTCGGCATAGACCTTTCCGAGAGCGATATCTCCGGTGAGATATTCCAAAACTTCTCGCAGCTCACTGAGCTCACACACCTTGATCTCTCCCACAACACGCTCCGTGGAGTAATTCCACCTGATTTAAGGCAGTGCCAGAAGCTTGTGCACCTCAATCTCTCGCATAATACTCTAGGTGGAGATTTGAATTTGACCGGCTTGAAGAGCTTACAATTGCTGGATTTAGCAGTCAACAGGTTTACTGGGGAACTTGAGTTGAATTTCCCTGCCATTTGTGACAATTTAGTCACTTTGAATGTTTCCGAGAATAACTTCGACGGTGGCATTGATAAGAGCTTTGATCAATGTTGGAAAATGCAGTACTTGGATTTGAGCGCCAACAATCTCAGTGGGGATATATGGATCGGGTTTCAGAGGCTGAGAGAGTTTTCAGTTTCAGAAAACTTTCTCAGTGGGTTTATTCCTTCGTCAGCTTTTAATGGAACTTGTAATCTTCAAGTTCTAGACCTGTCAGAAAATGGGTTTGTTGGTGAAGCCCCGAAGGGGGTTGCAAACTGTAAAAGTCTAACAAGTCTGAATCTTTCTGGTAACAATTTCACTGGAAATATTCCCATTGAAATTGGTTCAATTTCAAACCTGGAAACATTGTACTTGGGGAACAACAGTTTTTCAAGAGAAATTCCAGAGACGTTGgtcaacttgaccaagttaaGGTTCTTGGATTTGAGCAGAAATGGCTTTGGCGGAGAGATACAAGACACAATTGGGAAATTTACGCAAGTCAAGTTCCTTGTTTTGCATTCAAATTCTTACACTGGAGGGTTACTTTCCTCAGGAATTCTCCAATTGCCAAACATTTCACGTTTAGACCTAAGTTTCAACAACTTTTCAGGTGGATTGCCAGTTGAAATCTCCAAAATGTCAAGTCTCAAGTTCTTAATGTTAGCCCACAATCAGTTCAGTGGACCTATTCCACATGAATTCGGAAACTTGCCTCTCCTACAAGCGCTTGACCTCTCATCCAACGCTTTAAATGGGTCAATCCCACCAACCCTTGGAAAGTTGAATTCTCTCTTATGGTTGATGCTTGCGAACAATTCATTAACTGGCGAAATCCCGAGAGAACTTGGAAACTGTACGAGCTTGTTATGGTTAAACCTTGCAAACAATAAGCTTTCTGGAAATTTTCCTTCTGAACTGACAACAATAGGAAGGGATGCCATGGCCACATTTGAATCAAACcgggaaaatgaaaagattgtTGCAGGCTCTGGCGAGTGCACAACAATGAAGAGATGGTTACCAGCAGATTACCCTCCATTCAGCTTTGTGTATACCATTCTGACAAGGAAAAATTGCAGAAGCCTTTGGGACAGGTTGCTTAAGGGTTATGGCGTTTTCCCAATCTGCTCATCCGGATCCACTTTCCGGTTACTCCACATATCTGGCTATGTTCAAGTAAGTGAGAACCAGCTCACTGGTGCAATTCCTTCAGAGATTGGGAACATGCAGAACTTTAGCATGTTGCATTTTGGCTTGAACAACTTCTCAGGGGAATTCCCACTTGAGGTGGGAAATTTACCACTTGtagtattaaatataaccaGAAACGGGTTTTCAGGTGAAATTCCAACAGAAATTGGCCACTTAAAATGTTTGAAGAATCTTGATCTCTCTTACAACAATTTCTCTGGGATATTTCCCACGAGCTTGAACAACTTGACCGAGCTTAGCAAATTCAATGTTTCATACAACCCCTTGATTTCTGGTACAATACCCTCTGCTGGGCAATTAGCTACTTTTGATAAAGATTCCTATTTAGGCGACCCCTTCTTGGATCTTCCAAAGTTCATTGATAATATCACAGATGAGAAAAATTCGACCTCTGacagagaaatgaaaaagccCAACAAGTTGACTgtgtttttggtctttctagcTCTTGCTCTGGCTTTCATCGTGTTTGGGCTTCTTTCCCTTATAGTCTGTTCATTGGTGAAAAGCCCATCAGATGAACCAGGGTACCTCTTGGGGGATACGAAATCCCGTCACGATTCCGGCAACTCCTCGCCATGGTTATCAGACACTGTTAAGATTATCCGCTTAAACAAGACAGCTTTTACACATGCTGACATTTTGAAAGCTACAGGGAATTTCTCAGAGGACAGAATCATTGGGAAAGGGGGTTTTGGAACAGTGTACAGAGGCGTATTCCCTAACGGTAGAGAAGTGGCAGTGAAGAAGCTCCAAAGGGAGGGACTTGAAGGCGAAAAAGAATTCCGAGCTGAAATGGAAGTTCTTAGCGGAAACGGGTTTAGTTGGCCTCACCCCAACCTTGTCACACTCTATGGGTGGTGCCTTGATGGTTCAGACAAGATACTGGTTTATGAGTACATAGAAGGTGGAAGCTTGGAGGATCTTGTGACTGATAGAACACGGTTCACATGGAAGAGACGTTTAGAAGTGGCAATTGATGTGGCCAGGGCCCTAGTCTATTTACACCATGAATGCTATCCTCCTATTGTTCATAGAGATGTGAAAGCAAGCAACGTGTTGTTAGATAAGGATGGGAAGGCCAGAGTTACAGACTTTGGTCTTGCTAGAGTTGTTGATATTGGAGATAGCCATGTTAGCACGATGGTTGCTGGCACGGTGGGCTACGTTGCCCCAGAATATGGACACACATGGCAAGCCACCACAAAAGGGGATGTATATAGTTTCGGAGTGTTGGCAATGGAGCTAGCAACAGCTAGAAGAGCAGTGGATGGAGGGGAAGAGTGCTTGCTGGAGTGGACTAGAAGAGTCATGGGTTATAGAAGGCATGGGTTTGGTAAATCTGTGAATGTGATTCCAGTTTTGTTGATGGGTTCTGGGCTTGTGGAGGGGGCAGTGGAGATGAGTGAGTTGCTAAGAATTGGAGTGAAATGCACAGCGGAGGCACCGCAGGCTAGGCCTAACATGAAGGATGTTCTGGCTATGCTCGTCAAGATATGCTATCCCAAGGGAGATTCAAGCTATGGATATCCTATTTA 3278 0.4268 MSEQETDSWVFLLFCSLILFTGNIVAGESLDTDTAVLVRLKSYLDNQTLADRGRYIEWDKNSTNPCQWSGISCSFIGTTLRVVGIDLSESDISGEIFQNFSQLTELTHLDLSHNTLRGVIPPDLRQCQKLVHLNLSHNTLGGDLNLTGLKSLQLLDLAVNRFTGELELNFPAICDNLVTLNVSENNFDGGIDKSFDQCWKMQYLDLSANNLSGDIWIGFQRLREFSVSENFLSGFIPSSAFNGTCNLQVLDLSENGFVGEAPKGVANCKSLTSLNLSGNNFTGNIPIEIGSISNLETLYLGNNSFSREIPETLVNLTKLRFLDLSRNGFGGEIQDTIGKFTQVKFLVLHSNSYTGGLLSSGILQLPNISRLDLSFNNFSGGLPVEISKMSSLKFLMLAHNQFSGPIPHEFGNLPLLQALDLSSNALNGSIPPTLGKLNSLLWLMLANNSLTGEIPRELGNCTSLLWLNLANNKLSGNFPSELTTIGRDAMATFESNRENEKIVAGSGECTTMKRWLPADYPPFSFVYTILTRKNCRSLWDRLLKGYGVFPICSSGSTFRLLHISGYVQVSENQLTGAIPSEIGNMQNFSMLHFGLNNFSGEFPLEVGNLPLVVLNITRNGFSGEIPTEIGHLKCLKNLDLSYNNFSGIFPTSLNNLTELSKFNVSYNPLISGTIPSAGQLATFDKDSYLGDPFLDLPKFIDNITDEKNSTSDREMKKPNKLTVFLVFLALALAFIVFGLLSLIVCSLVKSPSDEPGYLLGDTKSRHDSGNSSPWLSDTVKIIRLNKTAFTHADILKATGNFSEDRIIGKGGFGTVYRGVFPNGREVAVKKLQREGLEGEKEFRAEMEVLSGNGFSWPHPNLVTLYGWCLDGSDKILVYEYIEGGSLEDLVTDRTRFTWKRRLEVAIDVARALVYLHHECYPPIVHRDVKASNVLLDKDGKARVTDFGLARVVDIGDSHVSTMVAGTVGYVAPEYGHTWQATTKGDVYSFGVLAMELATARRAVDGGEECLLEWTRRVMGYRRHGFGKSVNVIPVLLMGSGLVEGAVEMSELLRIGVKCTAEAPQARPNMKDVLAMLVKICYPKGDSSYGYPI 1092
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g01184 1092 ProSitePatterns Serine/Threonine protein kinases active-site signature. 923 935 IPR008271 GO:0004672|GO:0006468
Bva06g01184 1092 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 2 1083 - -
Bva06g01184 1092 SUPERFAMILY Protein kinase-like (PK-like) 783 1077 IPR011009 -
Bva06g01184 1092 ProSitePatterns Protein kinases ATP-binding region signature. 807 830 IPR017441 GO:0005524
Bva06g01184 1092 SUPERFAMILY RNI-like 66 287 - -
Bva06g01184 1092 Gene3D Ribonuclease Inhibitor 546 701 IPR032675 -
Bva06g01184 1092 Pfam Leucine rich repeat N-terminal domain 31 74 IPR013210 -
Bva06g01184 1092 SMART serkin_6 801 1078 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva06g01184 1092 Gene3D Ribonuclease Inhibitor 29 173 IPR032675 -
Bva06g01184 1092 Pfam Leucine rich repeat 99 140 IPR001611 GO:0005515
Bva06g01184 1092 Pfam Leucine rich repeat 221 281 IPR001611 GO:0005515
Bva06g01184 1092 Pfam Leucine rich repeat 366 426 IPR001611 GO:0005515
Bva06g01184 1092 PRINTS Leucine-rich repeat signature 413 426 - -
Bva06g01184 1092 PRINTS Leucine-rich repeat signature 106 119 - -
Bva06g01184 1092 SMART LRR_typ_2 103 127 IPR003591 -
Bva06g01184 1092 SMART LRR_typ_2 413 436 IPR003591 -
Bva06g01184 1092 SMART LRR_typ_2 365 389 IPR003591 -
Bva06g01184 1092 SMART LRR_typ_2 316 340 IPR003591 -
Bva06g01184 1092 SMART LRR_typ_2 219 243 IPR003591 -
Bva06g01184 1092 SMART LRR_typ_2 437 461 IPR003591 -
Bva06g01184 1092 SMART LRR_typ_2 632 655 IPR003591 -
Bva06g01184 1092 SMART LRR_typ_2 292 315 IPR003591 -
Bva06g01184 1092 Gene3D Ribonuclease Inhibitor 383 504 IPR032675 -
Bva06g01184 1092 ProSiteProfiles Protein kinase domain profile. 801 1079 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva06g01184 1092 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 2 1083 - -
Bva06g01184 1092 Pfam Leucine Rich Repeat 294 316 IPR001611 GO:0005515
Bva06g01184 1092 Gene3D Transferase(Phosphotransferase) domain 1 881 1086 - -
Bva06g01184 1092 SUPERFAMILY L domain-like 257 670 - -
Bva06g01184 1092 Gene3D Phosphorylase Kinase; domain 1 766 880 - -
Bva06g01184 1092 CDD STKc_IRAK 807 1079 - -
Bva06g01184 1092 Pfam Protein kinase domain 802 1072 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva06g01184 1092 Gene3D Ribonuclease Inhibitor 174 263 IPR032675 -
Bva06g01184 1092 Gene3D Ribonuclease Inhibitor 264 382 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g01184 Bva-Chr6 9282544 9286712 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g01184 39 1079 Receptor kinase-like Gene Family AT4G39400 33.856 5.94e-150 477
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-2 Bva06g01184 Pkinase 2.4e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g01184 - - gmx:100816573 1619.75
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g01184 06 9282544 9286712 Bva06g01184 06 9282544 9286712 ECH