Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g01136 ATGAGGACTATAAATTCAAGAGAAGGTTTTGAAGGTGATAGCATCAATATTGAGAAACTCTCAAAGGCACCCTCCACTTCAAGACAATGGCCAGGGTTCAGAAATCCAAGAATTGTGAGAGTTTCACGTACGTTTGGAGGAAAAGATAGACACAGCAAGGTTTGCACCATTCGGGGACTGAGGGACAGGCGAATTAGGCTCTCAGTAACCACAGCAATTCAGTTATATGATCTTCAAGATAAGCTTGGGGTCAGCCAACCCAGCAAGGTCATAGATTGGTTACTTGAAGCCACTAAAAATGATATTGACCTGCTCCCACCACTTCAATTCCCTCAGAGTTTTCCTCAATTTCATCACCAAACCCTACAGCTGCCTTATCATGAATCAAGTGCCTCTCAGTCTTCTCTTGGAACCTTCTATGGTGCTAATTCCACATTTGGGGAAAGTCAAAATCTTTTGGCAAAGTCAAGGTTTTGGGATATAGATGCAGTGTCAAGACTAAAAGATAgggaaaataatgaaagaggATCCATATTTGAGAAAGGAAAGTGGATCAAAACAAATGAACATGAAAGTGAAGATGGAATTGGTGGATACGGCAGCCAGATTTCAGTTCAGAATCTTTTCCCCACAGGGAGTCACTCTCCCTTACCTGTTATGCTAAATAATGCCATGCCCATGACATATAACTCTTACCATTCTGACCCTTCAAATCTATCTCTATCCCACTTTGGAAGTAGTCATGGGCTATTTCCGTCTCAGGCTGCAGATCCTCACCAGAGCGGTGGAAATGGCGTGCAATTTCCATCCTCTTTGCACGTACCATCTGGTTCccaattattcttttgtcCACCTTCTGCAACATCATCACTTTTTGCTCCTTGTGCTCCATACATTACCAGTTCAGCAGAAAGTGACACAAGACCATTCAACCAAATTCAGTTCCTGAGCTCAAGTTCTCAAGCCTTGACTCGTTCTCTCATTCCATCATTTCATTCAAACGATTCACCTCTCAAACCCTTCCCAACACCATTTAGTTCAAAGCTTCTTGGTTTAGATAATGACTATCATCGTGACCAACCAAATAAGGATATATA 1097 0.4093 MRTINSREGFEGDSINIEKLSKAPSTSRQWPGFRNPRIVRVSRTFGGKDRHSKVCTIRGLRDRRIRLSVTTAIQLYDLQDKLGVSQPSKVIDWLLEATKNDIDLLPPLQFPQSFPQFHHQTLQLPYHESSASQSSLGTFYGANSTFGESQNLLAKSRFWDIDAVSRLKDRENNERGSIFEKGKWIKTNEHESEDGIGGYGSQISVQNLFPTGSHSPLPVMLNNAMPMTYNSYHSDPSNLSLSHFGSSHGLFPSQAADPHQSGGNGVQFPSSLHVPSGSQLFFCPPSATSSLFAPCAPYITSSAESDTRPFNQIQFLSSSSQALTRSLIPSFHSNDSPLKPFPTPFSSKLLGLDNDYHRDQPNKDI 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g01136 365 PANTHER TRANSCRIPTION FACTOR TCP17 11 361 - -
Bva06g01136 365 Pfam TCP family transcription factor 47 151 IPR017887 -
Bva06g01136 365 ProSiteProfiles TCP domain profile. 47 105 IPR017887 -
Bva06g01136 365 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 11 361 IPR005333 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g01136 Bva-Chr6 9030645 9032749 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g01136 32 357 TCP Transcription Factor Family AT5G60970 41.317 7.25e-55 182
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Bva06g01136 TCP 3.4e-26 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g01136 - - gmx:100788984 375.555