Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g01132 ATGCCAGGTTTAAAAAGCGCAAGAGCTCCTCTCTTACAGAGCAGGGAACAGGGACAGAGAGATGAAACTTCAAGTCTAACACTAACAGACCTTGAACATGGTTATGCAGTGCCGGCGGCAAATGTGGGATTTTGTCGGGTGCTTTCGCTTGCAAAGTCTGAGGCTGGGACGTTGACAATTGCGACGATAGCTCTGTTGGTTGCATCCACAACAAATGTTTTAATTCCAAAATTTAGTGGCAAGATAATTGACATTGTCTCGGGAGATATTCAAACTCCTCAGGAGAAAGCTGAAGCTTTGGATGCTGTTCAGAACACTATACTAAGTATATTTCTGATTGTTGTTGTTGGCTCAGTTTGCACAGCACTTCGAACTTGGCTTTTTTCCACTACTAGTAACATGGTAATTAATCGCTTGAGAAAGGAACTGTTTAGTCACCTCATGCACCAGGAGATAGCCTTTTTTGATGTCACTCAAACTGGAGAACTCCTAAGCAGGCTATCTGAAGATACTTGGATCTTAAGAAGTGCAGCAACTCAAAATCTTTCTGATGCTCTGACACATTTATCAACTGCATTTATTGGTATTGGCTACATGTTTGCAACATCGTGGAAATTAACCTTGTTGGCTCTGGCTGTTGTGCCTGCTATATCTGTTGCTGTACATAGATTTGGCCGCTTCGTGCGTGGACTTTCTCATAAAATTCAAGATGCTGCTGCAGGTGCTGCTTCAGTTGCCGAGGAATCTTTTGGTGGTATAAGAACAGTAAGATCTTTTGCCCGAGAAGAATACGAAATATCGCGCTACTTTAAGAAACTGGATGAGACACTTCAGCTTGCTCTTATACAATCCAGACTGGGTGGGCTATTTTCTGGTACCCTTAATGCTGCATCTACTCTATCAGTTATCGCAGTTGTTCTATATGGAGCAAATTTGACAATTAAGGGTTCTATGTCATCTGGTGACTTCACatctttcattctttataGCCTCACAGTTGGATCTGCTGTATCTGGTCTATCATCATTGTACACAGTGGTTATGAAAGCTGCAGGTGCTAGCAGACGGGTATTTCAACTTATGGATCGTGTCTCCTCCATGCCTAAGTCAGGAAATAAGTGTCCTCTGGGTGATCAACTGCAAGATGGTGAACTGGAACTTGATGATGTCTGGTTTGCTTATCCTTCACGCCCTAATCATACAATACTAAAGGGAATTACATTGAAACTGCGGCCTGGTTCAAAGGTTGCTCTTGTTGGACCAAGTGGTGGTGGTAAGACTACAATTGCAAACTTGATTGAAAGATTTTATGACCCAGTGAAGGGAAAGATTCTGCTGAATGGGGTTCCGCTGGTGGAAATATCCCATAAACACCTACACGGAAAGGTCAGCATAGTGAGTCAGGAGCCGACACTTTTCAGCTGTTCCATAGCGGAGAACATAGCTTATGGATTAGATGGCAAAGTTGATGATTTGGACATAGAAAATGCAGCTAAAATGGCCAATGCCCATGAATTTATATCGAAATTCCCAGAAAAGTATCAGACCCATGTTGGAGAACGTGGAGTAAGACTCTCAGGTGGACAGAAACAGAGAATAGCAATTGCTAGAGCAGTGCTTATGAATCCTAGGATTCTACTTCTTGATGAAGCCACGAGTGCCCTGGATGCTGAAAGCGAATACCTAGTACAGGATGCCATGGATTCTCTGATGAAGGGAAGGACAGTTCTAGTCATTGCTCACAGGCTATCAACAGTTAAAAGCGCTGATACAGTAGCAGTTGTTTCTGATGGTCAAATAGTTGAGAGTGGCCCTCATGAAGAACTTCTCAGCAAGGATGGTTTTTACACTGCATTAGTCCGGAGACAGCTTcaaagcaataaata 1886 0.4247 MPGLKSARAPLLQSREQGQRDETSSLTLTDLEHGYAVPAANVGFCRVLSLAKSEAGTLTIATIALLVASTTNVLIPKFSGKIIDIVSGDIQTPQEKAEALDAVQNTILSIFLIVVVGSVCTALRTWLFSTTSNMVINRLRKELFSHLMHQEIAFFDVTQTGELLSRLSEDTWILRSAATQNLSDALTHLSTAFIGIGYMFATSWKLTLLALAVVPAISVAVHRFGRFVRGLSHKIQDAAAGAASVAEESFGGIRTVRSFAREEYEISRYFKKLDETLQLALIQSRLGGLFSGTLNAASTLSVIAVVLYGANLTIKGSMSSGDFTSFILYSLTVGSAVSGLSSLYTVVMKAAGASRRVFQLMDRVSSMPKSGNKCPLGDQLQDGELELDDVWFAYPSRPNHTILKGITLKLRPGSKVALVGPSGGGKTTIANLIERFYDPVKGKILLNGVPLVEISHKHLHGKVSIVSQEPTLFSCSIAENIAYGLDGKVDDLDIENAAKMANAHEFISKFPEKYQTHVGERGVRLSGGQKQRIAIARAVLMNPRILLLDEATSALDAESEYLVQDAMDSLMKGRTVLVIAHRLSTVKSADTVAVVSDGQIVESGPHEELLSKDGFYTALVRRQLQSNK 628
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g01132 628 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 4 626 IPR039421 -
Bva06g01132 628 PIRSF ABC_prm/ATPase_B 5 628 - -
Bva06g01132 628 Pfam ABC transporter 403 553 IPR003439 GO:0005524
Bva06g01132 628 Gene3D ABC transporter type 1, transmembrane domain 109 381 IPR036640 GO:0005524|GO:0016021
Bva06g01132 628 Pfam ABC transporter transmembrane region 58 333 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Bva06g01132 628 PANTHER ABC TRANSPORTER B FAMILY MEMBER 25 4 626 - -
Bva06g01132 628 MobiDBLite consensus disorder prediction 1 24 - -
Bva06g01132 628 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 385 622 IPR003439 GO:0005524
Bva06g01132 628 SUPERFAMILY ABC transporter transmembrane region 46 362 IPR036640 GO:0005524|GO:0016021
Bva06g01132 628 SMART AAA_5 412 606 IPR003593 -
Bva06g01132 628 ProSitePatterns ABC transporters family signature. 525 539 IPR017871 GO:0005524
Bva06g01132 628 Gene3D - 383 625 IPR027417 -
Bva06g01132 628 CDD ABC_MTABC3_MDL1_MDL2 386 623 - -
Bva06g01132 628 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 60 349 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Bva06g01132 628 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 381 623 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g01132 Bva-Chr6 8992872 8996535 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g01132 111 623 Calmodulin-binding Proteins AT2G36910 37.476 1.96e-93 311
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g01132 - - var:108320153 944.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g01132 06 8992872 8996535 Bva06g01132 06 8992872 8996535 ECH