Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g01131 ATGTCTCCACCAATGGAACAGGGACAGAAAGATGATGCCTCATGTCTAACAGACCTGGAACATGGTTATGCAGCACCGGCGGCAAATGTGGGATTTTGTCGGGTGCTGTCACTTGCAAAGCCCGAGGCTGGGAAGTTGGTAATTGCGACGATAGCTCTGTTGGTTGCATCCACAACAAATGTTTTAATTCCAAGATTTAGTGGCAAGATAATTGACATTGTCTCAGGAGATATCCAAACTCCTCAAGAGAAAGCTAAAGCTTTGGATGCTGTCCAGAACACTATGCTAAGTATCTTTCTGACTGTTGTTGTTGGCTCAGTTTGCACAGCACTTGAAAGTTGGCTTTTTGATATTGCTAGTAACATGGTTATTACTCGCTTGAGAAAGAAACTTTTTAGTCAACTCATGCACCAGGAGATAGCCTTTTTTGATGTCACTAAAACTGGGGAGCTTCTAAGCAGGCTATCTGAAGATACTTGGATCATAAAAGATGCAGCAACTCATAGTCTTTCTGCTGCTCTGACAGATTTATCAACTACATTTATTGGTATTGGCTACATGTTTGCAACATCGTGGAAATTAACCTTGTTGGCTCTGTCTATTGTGCCTGCTATATCTGTTGCTGTACATAAATTTGGCCGCTTCGTGCGTGAACTTTCTCATAAAACTCAAGATGCTGGTGCAAGAGCTTCTTCAGTCGCCGAGgAATCTTTTGGTGCTATAAGAACAGTAAGATCTTTTGCCCAAGAAGAATATGAAATATCACGCTACTGTAAGCAACTGGATGAGACACTTCAGCTTGCTCTTAGACAATCTAAAGTGTCTGCGCTATTTTCTGGTGCCTTTAATGCTGCATCTACTCTATCAGTTATAGCAGTTGTTATATATGGAGCAAATTTGACAATCAAGGGTTCCATGTCATCGGGTGACCTTACatctttcattctttataGCCTCACAGTTGGATCTGCTGTATCTGGTCTATCATCATTGTATACAGTGGCCATGAGAGCTGTAGGTGCCAGCAGACGGGTATTTCAACTTATGGATCGTGTCTCCTCCATGCCCAAGTCAGGGAATAAGTGTCCTCTGGGTGATCAAGTTCAAGACGGTGAAGTGGAACTTGATGATGTCTGGTTTGCTTATCCCTCACGCCCTAATCATACAATACTAAAGGGAATTACACTAAAACTGCGGCCTGGTTCAAAGGTTGCTATTGTTGGACCAAGTGGTGGTGGTAAgACTACAATTGCAAACTTGATTGAAAGATTTTATGATCCAGTGAACGGAAAGATTCTGCTGAATGGGGTTCCTCTGGTGGAAATATCCCATAAACATCTACACAGAAAGATCAGCATAGTGAGTCAGGAGCCAACACTCTTCAACTGTTCCATTGCGGAGAACATAGCTTATGGATTTGATAGTAAAATTGATGATTTGGATATAGAAAATGCAGCTAAAATGGCCAATGCCCACGAATTTATATCTAAATTCCCAGAAAAGTATCAGACCCATGTTGGAGAACGTGGAGTAAGACTTTCAGGAGGACAGAAACAGAGAATAGCAATTGCTAGAGCAGTGCTTATGAATCCAAGGATTCTGCTTCTTGATGAAGCCACTAGTGCCCTGGATGCTGAAAGCGAATACCTAGTACAGGATGCCATGGATTCTCTGATGAAGGGAAGGACAGTTCTAGTCATTGCTCACAGGCTATCAACTGTTAAAAGCGCTGATACTGTAGCAGTGGTTTCTGATGGTCAAATAGTTGAGAGTGGAAGTCATGAAGAACTTCTCAGCAAGAATGGTTTCTACACTGCATTAGTCCGAAGACAGCTTCAGagcaatgaata 1850 0.4168 MSPPMEQGQKDDASCLTDLEHGYAAPAANVGFCRVLSLAKPEAGKLVIATIALLVASTTNVLIPRFSGKIIDIVSGDIQTPQEKAKALDAVQNTMLSIFLTVVVGSVCTALESWLFDIASNMVITRLRKKLFSQLMHQEIAFFDVTKTGELLSRLSEDTWIIKDAATHSLSAALTDLSTTFIGIGYMFATSWKLTLLALSIVPAISVAVHKFGRFVRELSHKTQDAGARASSVAEESFGAIRTVRSFAQEEYEISRYCKQLDETLQLALRQSKVSALFSGAFNAASTLSVIAVVIYGANLTIKGSMSSGDLTSFILYSLTVGSAVSGLSSLYTVAMRAVGASRRVFQLMDRVSSMPKSGNKCPLGDQVQDGEVELDDVWFAYPSRPNHTILKGITLKLRPGSKVAIVGPSGGGKTTIANLIERFYDPVNGKILLNGVPLVEISHKHLHRKISIVSQEPTLFNCSIAENIAYGFDSKIDDLDIENAAKMANAHEFISKFPEKYQTHVGERGVRLSGGQKQRIAIARAVLMNPRILLLDEATSALDAESEYLVQDAMDSLMKGRTVLVIAHRLSTVKSADTVAVVSDGQIVESGSHEELLSKNGFYTALVRRQLQSNE 616
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g01131 616 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 368 611 IPR027417 -
Bva06g01131 616 Gene3D ABC transporter type 1, transmembrane domain 98 369 IPR036640 GO:0005524|GO:0016021
Bva06g01131 616 Pfam ABC transporter 391 541 IPR003439 GO:0005524
Bva06g01131 616 Pfam ABC transporter transmembrane region 46 322 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Bva06g01131 616 SUPERFAMILY ABC transporter transmembrane region 34 350 IPR036640 GO:0005524|GO:0016021
Bva06g01131 616 CDD ABC_MTABC3_MDL1_MDL2 373 611 - -
Bva06g01131 616 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 47 337 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Bva06g01131 616 Gene3D - 371 613 IPR027417 -
Bva06g01131 616 PIRSF ABC_prm/ATPase_B 6 616 - -
Bva06g01131 616 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 373 610 IPR003439 GO:0005524
Bva06g01131 616 ProSitePatterns ABC transporters family signature. 513 527 IPR017871 GO:0005524
Bva06g01131 616 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 9 614 IPR039421 -
Bva06g01131 616 PANTHER ABC TRANSPORTER B FAMILY MEMBER 25 9 614 - -
Bva06g01131 616 SMART AAA_5 400 594 IPR003593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g01131 Bva-Chr6 8987303 8991132 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g01131 63 616 Calmodulin-binding Proteins AT2G36910 36.348 3.15e-98 324
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g01131 - - vvi:100248338 947.962