Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g01128 ATGGAGTATCTATGGTCCTCCATAACTGGATCTGTTGCCCATCGTAGTGGCTTCACCGTCTTACTGGTGTTATTGCTCTCTTGCTGCACATTCACTTCTACAGAAGCTTATGACGCACTTGATCCAACTGGGAATATAACAATCAAATGGGATATCATGAGCTGGACTCCTGACGGCTATGTTGCTGTCGTTACAATGTACAACTTTCAGCAGTATCGCCATATTCAGACACCTGGGTGGACGCTAGGGTGGACATGGGCTAAAAAGGAAGTGATTTGGAGCATGATGGGAGGCCAAACCACAGAGCAAGGGGATTGTTCAAAGTACAAAGGGAGCACTCCACATTGTTGTAAGAAAGATCCAACAGTAGTTGATTTACTGCCTGGAACTCCTTACAACCAGCAGATTGCAAACTGTTGCAAAGGGGGAGTTTTAAATTCATGGGCTCAGGACCCAGCTACTGCAGTAGCATCATTTCAAGTTAGTGTCGGTGCTGCAGGAACCACTAACAAAACTGTCAAATTGCCCAGAAATTTCACACTCAAAGCACCTGGGCCTGGATATACTTGTGGTCCTGCAAAGATTGTGAGGCCAACCAAATTTATTACTAATGACAAAAGGAGAACCACTCAAGCATTGATGACGTGGAATGTTACCTGCACATATTCTCAATTCCTGGCTCAAAAGACACCAACTTGCTGCGTTTCCCTGTCATCTTTTTACAATGATACAATAGTTAGCTGCCCAACCTGCGCATGTGGTTgtcaaaacaacaaaacagaCACTGGCAACTGTGTACATCCAGACTCGGCACATTTAGCTTCAGTGGTATCATCTCCAGGCAAAGCTGTCAATACACCTTTAGTCCAATGTACCAGCCATATGTGTCCGATTCGAGTGCATTGGCATGTGAAGCTCAATTACAAAGAATACTGGAGAGTGAAGGTCACAATCACAAATTTCAATTACAGAATGAATTACACACAATGGAATCTTGTCGTTCAGCACCCCAATTTCGATAATCTAACTCAGCTTTTCAGTTTCAATTACAAGTCAATTAATCCTTACGAGGGCTTGAATGATACTGGAATGCTATATGGAGTTAAGTTCTATAATGATTTTCTTAGCCAAGCTGGACCCTATGGGAATGTGCAATCAGAGCTCTTATTTAGAAAGGACCAATCAACCTTCACATATGATAAAGGCTGGGCTTTCCCACGAAGAATTTATTTCAATGGGGATAACTGTGTCATGCCACCTCCGGATTCCTACCCATGGCTGCCAAATGCAAGTTCGAAGCTAGTATTCTCCCTACTAACCACTCTCATAGCTAGCTTTGCATCTTTGGTAATCTTATTGAGTTA 1364 0.4252 MEYLWSSITGSVAHRSGFTVLLVLLLSCCTFTSTEAYDALDPTGNITIKWDIMSWTPDGYVAVVTMYNFQQYRHIQTPGWTLGWTWAKKEVIWSMMGGQTTEQGDCSKYKGSTPHCCKKDPTVVDLLPGTPYNQQIANCCKGGVLNSWAQDPATAVASFQVSVGAAGTTNKTVKLPRNFTLKAPGPGYTCGPAKIVRPTKFITNDKRRTTQALMTWNVTCTYSQFLAQKTPTCCVSLSSFYNDTIVSCPTCACGCQNNKTDTGNCVHPDSAHLASVVSSPGKAVNTPLVQCTSHMCPIRVHWHVKLNYKEYWRVKVTITNFNYRMNYTQWNLVVQHPNFDNLTQLFSFNYKSINPYEGLNDTGMLYGVKFYNDFLSQAGPYGNVQSELLFRKDQSTFTYDKGWAFPRRIYFNGDNCVMPPPDSYPWLPNASSKLVFSLLTTLIASFASLVILLS 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g01128 454 PIRSF COBRA 10 454 IPR006918 GO:0010215|GO:0031225
Bva06g01128 454 PANTHER COBRA-LIKE PROTEIN 11 453 - -
Bva06g01128 454 PANTHER PROTEIN COBRA 11 453 IPR006918 GO:0010215|GO:0031225
Bva06g01128 454 Pfam COBRA-like protein 60 223 IPR006918 GO:0010215|GO:0031225
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g01128 Bva-Chr6 8971246 8974081 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g01128 48 439 COBRA Gene Family AT5G60920 82.741 0.0 715
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g01128 - - pvy:116129458 822.772
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g01128 06 8971246 8974081 Bva06g01128 06 8971246 8974081 ECH