Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g01125 ATGGAATCTTGGAGCTATGTTTCTGAAGAGAAGGGCTTTATGTCCAATGATGCGTTTTCACCTCCTAATACGCTATCCAGAAGCAAAACTTCCTTCTTGGGTTGGGACTTGAAAACCCCTTGTAGTTTTGGCAACGACATGTTAGCTTCGGGTCAACAAAACATTGAGAATCAAGGTTTTGAGGAATTGGGTTTTCCAGAAATGTTGGGGAGACAATTGTCCGATGATTCCGTTGTTGGTGTTCCTAGCAGAAAGCTGGATGGCGGTCCTCTCGGAAGAACCATTATGGGTGCTCCAAATGGGTTTTGTGGAGGAGAAGACTCCAATTCGAAGCTGTCAAACTCTGTGGTTGACTCAAACAGTCGTGACTCGCTCATTGATTTGAAGCTGGGACGATTTCCTGATCACAGAGATGCTAATGATTCGACATTCTCCAAAGGAGCCCCAATTTTGTCTTCATCCGAGTCATCTACACCGCCCAAAAGAGTGCGAGCTTCGGGGACACTGTCTCAAACTGCCTTCTGCCAAGTCTATGACTGCAACAAGGATCTGAGTGCCTGTAAAGACTACCACAAGAGGCACAAAGTTTGTGAGGTTCACTCCAAGACTGCAAAAGTTATAGTGAACGGTATTGAACAGAGGTTCTGCCAGCAATGTAGTAGGTTTCATTTGCTGTCTGAATTTGATGATGGTAAGCGCAGCTGCCGCAAACGCCTTGCAGGCCACAACGAGCGTCGAAGAAAGCCGCAAGTGAATATTCACTCTGGAAAGACCGGGAGGTTGCTTCAGCCATATACTAATGGCAGATTCCCGGGGACTATGCTGACAACAGCATCGTTTATTTGTCAAGAGATACTCCCCAGTCGGGTTCTGCGTCCTGAGAAATATGGAAACAATGACTGGTGGAGACCTATAAAAGTTGAAGATGGGACTGACTATAGGAATCTATCTACTATTCCAGTCGCAAATGGGCATTCACAGTCAAGATCTTTATTCCCTCCGTATAATGTTGAGAAACAGTTCCCTTTTCTTCATGAAAATAGCGCTACAACCCCTACAGGAAGCATCTTTTGTGATAACAGTAGCCATTATCCACCAGCTCTTGGTGGTCCAAATTCTGGTCCGCGACCATTATTTCAAAACGCTTCCTTAGGAAGCGAGGactttaatgtttttgatACATCATCAACTGTTCAAGGATTGTCGGGAATTTCAGATGCTGGCTGTGCTCTCTCTCTTCTGTCATCTCAATCCCAGAACTCTTCAAGCCATTCGTCAGGAATTCCCGTGGCTCGCCCCTTGGTTATCCCAAGCAGCCATGGTAGCCATTACAACATGAGTTCGGTATCTGAAAAGATCATTGGAATAAGCTCGCAGTCACAGGCTTCCAGAAGCGGGGTGTCTGTGTCAGATAGGTTTCCATCTGAAATGAATGTTGCTGGTGGGAATCATCTTGGTCCTGTGTTGATATCAGACAATAATGAccttgtcaactttgaaatggCAGATGGGATTTTCCAAAGCTCAGATTTTGTCAACATGAAAGCTCGTCTTTCTTCTAATGATGGCCCTACCATCGACTTGCTTCAGCTCTCATCACAGCTCCAGCGAGTTGAGCATCAGAGGCAATCCATGCAAGTGAAGCAAGAAAATGATTCTTCCTGCTCTCTCCGGATCACTTA 1682 0.4477 MLTTASFICQEILPSRVLRPEKYGNNDWWRPIKVEDGTDYRNLSTIPVANGHSQSRSLFPPYNVEKQFPFLHENSATTPTGSIFCDNSSHYPPALGGPNSGPRPLFQNASLGSEDFNVFDTSSTVQGLSGISDAGCALSLLSSQSQNSSSHSSGIPVARPLVIPSSHGSHYNMSSVSEKIIGISSQSQASRSGVSVSDRFPSEMNVAGGNHLGPVLISDNNDLVNFEMADGIFQSSDFVNMKARLSSNDGPTIDLLQLSSQLQRVEHQRQSMQVKQENDSSCSLRIT 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g01125 287 Coils Coil 255 275 - -
Bva06g01125 287 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 1 287 IPR044817 GO:0003677
Bva06g01125 287 PANTHER 1 PROTEIN, PUTATIVE-RELATED 1 287 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g01125 Bva-Chr6 8959175 8963407 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g01125 - - gmx:100817547 363.614
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g01125 06 8959175 8963407 Bva05g00578 05 2865905 2870273 ECH
Bva06g01125 06 8959175 8963407 Bva06g01125 06 8959175 8963407 ECH