Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g01124 ATGGACCTTCATGAATATGATAAGCGTATGCCCAAAATCATGTCAATTCTAAACAGCGACAGCATAATGAAAACACTGGAGAAGTACCAGAGGTACAGTTATGGTTCACTGCAATCCACCCGGCCAACCAGTGACAGTACTCAGAGCAGCTACCAGGATTATTTGAGATTAAAAGCCACGGTAGAACACCTCCAACGTTCACAGAGAAACCTACTAGGGGAAGATCTTTCTGAAATGAATACAAAGGACCTCGATCAGCTTGAAAATCAACTCGAGGTAGCACTGAGAAATATTAGGTCAACAAAGACTCAATTCATGCTTGATCAACTTGCAGATCTTCAGAAccggGAAAAGGTGCTCAATGAAACTACTAACGCCTTAAGGAGGAAGTTGGAAGAGATCAGTGGCAACGCCCAAGTTGCCCATAGACTGGCGTGGGAAGCTGGAGGGCCTAACATCCACTACACTTGCTTTCCTTCGCAATCGGACGGGCCTTTTCAGCCTTTGGGGGTCAACCCCAATTTGCAAATTGGATACAATCCGGTGGGTCCTGATGATGTAAATGTTGGAGCTGCAGCCTTAAACATTCAAGGATTCGTCACTGGGTGGATGCTTTG 617 0.4506 MDLHEYDKRMPKIMSILNSDSIMKTLEKYQRYSYGSLQSTRPTSDSTQSSYQDYLRLKATVEHLQRSQRNLLGEDLSEMNTKDLDQLENQLEVALRNIRSTKTQFMLDQLADLQNREKVLNETTNALRRKLEEISGNAQVAHRLAWEAGGPNIHYTCFPSQSDGPFQPLGVNPNLQIGYNPVGPDDVNVGAAALNIQGFVTGWML 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g01124 205 PANTHER DEVELOPMENTAL PROTEIN SEPALLATA 1 14 193 - -
Bva06g01124 205 Coils Coil 77 104 - -
Bva06g01124 205 Pfam K-box region 44 132 IPR002487 GO:0003700|GO:0005634|GO:0006355
Bva06g01124 205 Coils Coil 110 130 - -
Bva06g01124 205 ProSiteProfiles K-box domain profile. 47 137 IPR002487 GO:0003700|GO:0005634|GO:0006355
Bva06g01124 205 PANTHER SERUM RESPONSE FACTOR HOMOLOG 14 193 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g01124 Bva-Chr6 8943603 8949371 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g01124 12 205 MADS-box Gene Family AT5G15800 41.905 4.43e-46 151
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g01124 K09264 - gmx:100797819 248.825
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva03g01969 03 17695025 17701056 Bva06g01124 06 8943603 8949371 ECH
Bva04g00396 04 2343001 2348341 Bva06g01124 06 8943603 8949371 ECH
Bva06g01124 06 8943603 8949371 Bva06g01124 06 8943603 8949371 ECH