Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g01116 ATGCAGGAAATACATTCCATGGGAGGAACTAGATTCTTTGGCGGTGGCGGAGACAGGAGGCTGAGACAGCACCACCAGAATCACCAGGCCTTGAAGTGCCCCAGGTGTGACTCCTTAAACACCAAGTTCTGTTATTACAACAATTACAATCTCTCTCAGCCGCGCCATTTCTGCAAGAGCTGCCGTAGATACTGGACCAAAGGCGGCGTTCTTCGTAACGTCCCCATCGGTGGTGGTTGCCGGAAATCAAAGCGCTCCAAACCCAAAAACTCTCCTACATCAGAAACCTCAGCTGCACGGACACCGCCGGCATCGCAACCACCGGAGCAAGAGCGGAACTCCAACTCTCATTCCAGCAGTGAAAGCTCCAGCCTCACCGCGGCCAACACCACAGCCGCTGCCACAGAAGCGTTATCAGCTCCGTCGTCAAACTCTGCGTCAAATGATAACAATTTGTTGGAGAATATTCATGAGTCCAAGTTCTTTATCCATCAAAATTCAAACCCTAGTTTTGAGCACACCGGTCTACCGGAGCAAGGAGGAGACTGCAGTGGTATTTTCTCAGAGATTGGGAACCTTACAAGTTTGATCACTTCGAACACCAAAGATACAATGGGTTTTGAATTTGGGAACATAGCTGATGCGTTGCCGTTTCAATTCACTGCTCAACAAGAAGGGAATGATCAACTATCCGACGTTCAGAATACTCATCAGTGGCAACATCACAAGGTAATGAGCATGAGTGACCATCAGGACTTTAAGTTGCCAGAGATCACGGGTGGGTCGTTGCTTGATCAGACGGTCCCCGTTGAGTTATCGGCGTTGCAGAGCAAAGCCAACAATGGGGGATTTGGATCGTTGGATTGGCAGGGGGGTGCAGATCAAAGTTTGTTTGATCTTCCTAACACCTTAGATCAAGCTTACTGGAGCCAGACTCAATGGACTACTGATCAAGACAACCTCAATTCTAGTCTCTATCTCCCCTG 986 0.4899 MQEIHSMGGTRFFGGGGDRRLRQHHQNHQALKCPRCDSLNTKFCYYNNYNLSQPRHFCKSCRRYWTKGGVLRNVPIGGGCRKSKRSKPKNSPTSETSAARTPPASQPPEQERNSNSHSSSESSSLTAANTTAAATEALSAPSSNSASNDNNLLENIHESKFFIHQNSNPSFEHTGLPEQGGDCSGIFSEIGNLTSLITSNTKDTMGFEFGNIADALPFQFTAQQEGNDQLSDVQNTHQWQHHKVMSMSDHQDFKLPEITGGSLLDQTVPVELSALQSKANNGGFGSLDWQGGADQSLFDLPNTLDQAYWSQTQWTTDQDNLNSSLYLP 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g01116 328 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 14 313 IPR045174 GO:0003700|GO:0006355
Bva06g01116 328 MobiDBLite consensus disorder prediction 90 150 - -
Bva06g01116 328 Pfam Dof domain, zinc finger 29 85 IPR003851 GO:0003677|GO:0006355
Bva06g01116 328 ProSitePatterns Zinc finger Dof-type signature. 33 69 IPR003851 GO:0003677|GO:0006355
Bva06g01116 328 MobiDBLite consensus disorder prediction 1 20 - -
Bva06g01116 328 ProSiteProfiles Zinc finger Dof-type profile. 31 85 IPR003851 GO:0003677|GO:0006355
Bva06g01116 328 PANTHER DOF ZINC FINGER PROTEIN 4 14 313 - -
Bva06g01116 328 MobiDBLite consensus disorder prediction 75 150 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g01116 Bva-Chr6 8900332 8902638 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g01116 18 328 C2C2-Dof Transcription Factor Family AT5G60850 44.688 3.01e-62 198
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Bva06g01116 zf-Dof 3.1e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g01116 - - zju:107419070 336.265
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g01116 06 8900332 8902638 Bva06g01116 06 8900332 8902638 ECH