Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g01113 ATGTCATGCCCAGAGGAAAATCCGATCCTTCATTTGAGAAGTAGTGATGGATTGACTGGAGAAACTGAAACTGAATGCTGCGTCTCCGATCTTGAGAGGAGGGGAAGCAACACAAACTTGTTTACCCTTTTCATGGAGCTTCCTCAAGCACGTCCCCAAGGAAGGAAACCGATGCATGACTTTCTCTCACTTTACAGTCATTCAACTGCCCAACAAGATCCAAGACCAACTTCTCAAGGAAATTTCCTGAAAACGCATGATTTCCTGCAGCCGCTGGAACGGGCAGAAACGAACACGAGTACTGCTAAGGAAGAAGCAGGAGACGAGATCTCGACGGTGGTTCAAAAGCCGGCACCGGAGCCAGCACCAACATCTTCTGTGGAGCACCTCCTGCCCGGAGGTATTGGGACTTACAGTATCAGTCACATCTCGTTTTTTAATAATCCGAGGGTCCCAAAGCCGGAGGAGGCATCGCCCCTTTTCGCACAGCCTCAGCCAACTAGTATGAGTACGGACAAAAATGATGAGCATTCCAACTGCAGTTCTTATACCGGAGGAAGTGGTTTCACTTTGTGGGAAGACTCTGCAGCTAACAAGGGAAAGACAGGGAAGGAGAATTTCGTCGACAAACCCCTCACCGCTgGCGCGACAGGATCAGCGGCTAGGGTAAGGCAGTGGGGGTTGTCGGAGCGAACGCCGCAGTCGTTTTCATACAATCGTCACAACAGCTtcaattctctctcttcttctcagTCCCAGACAACTGGTCACAAGAGCCAGAGTTTTATGGAAATTATCAAATCCGCCAAGGATTGTTCCCAGGACGACGAACTTGACAATGAAGAAGCATTCGTTCTCAAAAAAGAATCCTCCGATACTCCACGATCCCGGGATCTGAGAGTGAAGGTGGATAGGAAGAGCCCCGATCAAAAGCCAAACACGCCACGATCAAAACATTCTGCGACAGAACAGCGTAGAAGGAGCAAAATTAATGACAGACTCCAGATGTTAAGAGAACTTATTCCACATAGTGACCAGAAAAGGGATaaagcttcttttttgttaGAGGTCATCGAATATGTTCACTTTTTACAAGAGAAGGTGCATAAGTATGAAGGGTCCCACCAAGGGTGGAATCTAGAACCAGAAAAATTGATGCCATGGAGAAATAATCACAGACCTGCAGAAAGTTATGTTGATCAATCACGTGACACAAGTAGTGGGGCAAGTCCATCTCCAACGCTGCTGTTTGCTTCCAAGATTGATGAAAGAAATATTGCCATTTCCCCAACAATTCCTGGGAGCGCCCAGCACATAGAATCTGGCACGAGTGCTGCAACCACCTTCAAACCAATGGATCAACATCCTGGAATAACAAATAAGACTATGCCAAGTCCCATCCCTTCACACCCGAATTTCTTCACTCCGACTCAAAATGGTGGGCCAGGTGGAGTAGCGTCACAACTCACACACAGATTGGCATCTGATGCAGAAAACAACGCATATCAACCTTCAGTGCAATGTCAGACTTATTCTTATGCTGCCGATAAGCTGAAAGAGAAAGATCTCACTATTGAAGGTGGTGCCATTAGCATATCAAGTGTTTACTCAAAAGGGTTGTTGGACACACTAACACAAGCACTGCAGAATTCAGGAGTGGATTTGTCAAAGGCTGGCATCTCAGTGCAAATTGAACTTGGCAAACAAGGAAACAACAGACCAGGGACACCAACACCAGGTGCCAAGGATGATGTGTTTGTTTCTAACAAACAAGGGGTGATGCGTCCTAGAGTTGCTGGCGTCGAGGACACCGATCAACCAGTAAAGAAGATGAAGTCATGCtg 1844 0.4604 MELPQARPQGRKPMHDFLSLYSHSTAQQDPRPTSQGNFLKTHDFLQPLERAETNTSTAKEEAGDEISTVVQKPAPEPAPTSSVEHLLPGGIGTYSISHISFFNNPRVPKPEEASPLFAQPQPTSMSTDKNDEHSNCSSYTGGSGFTLWEDSAANKGKTGKENFVDKPLTAGATGSAARVRQWGLSERTPQSFSYNRHNSFNSLSSSQSQTTGHKSQSFMEIIKSAKDCSQDDELDNEEAFVLKKESSDTPRSRDLRVKVDRKSPDQKPNTPRSKHSATEQRRRSKINDRLQMLRELIPHSDQKRDKASFLLEVIEYVHFLQEKVHKYEGSHQGWNLEPEKLMPWRNNHRPAESYVDQSRDTSSGASPSPTLLFASKIDERNIAISPTIPGSAQHIESGTSAATTFKPMDQHPGITNKTMPSPIPSHPNFFTPTQNGGPGGVASQLTHRLASDAENNAYQPSVQCQTYSYAADKLKEKDLTIEGGAISISSVYSKGLLDTLTQALQNSGVDLSKAGISVQIELGKQGNNRPGTPTPGAKDDVFVSNKQGVMRPRVAGVEDTDQPVKKMKSC 570
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g01113 570 MobiDBLite consensus disorder prediction 240 285 - -
Bva06g01113 570 Gene3D - 268 341 IPR036638 GO:0046983
Bva06g01113 570 MobiDBLite consensus disorder prediction 20 41 - -
Bva06g01113 570 MobiDBLite consensus disorder prediction 1 89 - -
Bva06g01113 570 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 268 342 IPR036638 GO:0046983
Bva06g01113 570 Pfam Helix-loop-helix DNA-binding domain 272 321 IPR011598 GO:0046983
Bva06g01113 570 MobiDBLite consensus disorder prediction 184 216 - -
Bva06g01113 570 MobiDBLite consensus disorder prediction 105 216 - -
Bva06g01113 570 MobiDBLite consensus disorder prediction 523 570 - -
Bva06g01113 570 CDD bHLH_AtBIM_like 269 345 - -
Bva06g01113 570 MobiDBLite consensus disorder prediction 117 147 - -
Bva06g01113 570 MobiDBLite consensus disorder prediction 350 370 - -
Bva06g01113 570 PANTHER BES1-INTERACTING MYC-LIKE PROTEIN 1 569 IPR044295 GO:0003700|GO:0006351|GO:0046983
Bva06g01113 570 PANTHER TRANSCRIPTION FACTOR BIM1 1 569 - -
Bva06g01113 570 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 270 320 IPR011598 GO:0046983
Bva06g01113 570 SMART finulus 276 326 IPR011598 GO:0046983
Bva06g01113 570 MobiDBLite consensus disorder prediction 403 443 - -
Bva06g01113 570 MobiDBLite consensus disorder prediction 356 370 - -
Bva06g01113 570 MobiDBLite consensus disorder prediction 403 441 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g01113 Bva-Chr6 8874326 8880039 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g01113 1 525 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G08130 48.352 7.44e-116 352
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Bva06g01113 HLH 1.6e-13 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g01113 - - gmx:100808016 721.079
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g01113 06 8874326 8880039 Bva06g01113 06 8874326 8880039 ECH