Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g01108 ATGGACATGAATGAGGCTGAGGAAGTCCGTGAATTACCTTATAATACAGCCTCAACCCATCATCACCTTCAAAATATGTATCCTACCCAGAAACCCATCGTTACCTCAAGCCTCACCAACAATATGGAAAGAGGCGAAGGGTCCGAAGGACACCATGTTTTGGCTCATCTGGGTTCATCTCAACCTCCGCATTGCATTCCATTTGACTACTCCCAGCTACACTCTTCAAACACTCCAATTCAAATCTCTGGTCATAGATTTTCTCCAAAGACATCATCTCATAGTGACAACAACAATTTCGATGAAGCAAAGCTGCTTCTTGATGACcgcaagaagaaaagaatgtaTTCCAACAGAGAATCTGCTCGCAGGTCACGAATGCGGAAGAAGCAACAAATACAAGCCCTTCAGTATCAAGTTGAAAATCTGCAGACCATGAATCATCAACTCTCTCAGAAGATCATTTACTTGCTAGAATGCAACCAGCAAATACTCCAACAGAATGCGCAACTAAAAGAGAAagtttcttctcttcaactaGCCCTGTCTGAGTTGTTAGTTCCTCTGTCACATGTTGAGGAAGCCAATCACATCTCCAATGCCATCATGCCTGAGCCTTCAGCTCGACCAGTCACAACTTCCGGTGTATA 650 0.4138 MDMNEAEEVRELPYNTASTHHHLQNMYPTQKPIVTSSLTNNMERGEGSEGHHVLAHLGSSQPPHCIPFDYSQLHSSNTPIQISGHRFSPKTSSHSDNNNFDEAKLLLDDRKKKRMYSNRESARRSRMRKKQQIQALQYQVENLQTMNHQLSQKIIYLLECNQQILQQNAQLKEKVSSLQLALSELLVPLSHVEEANHISNAIMPEPSARPVTTSGV 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g01108 216 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 108 171 IPR004827 GO:0003700|GO:0006355
Bva06g01108 216 SUPERFAMILY Leucine zipper domain 110 161 IPR046347 GO:0003700|GO:0006355
Bva06g01108 216 SMART brlzneu 106 170 IPR004827 GO:0003700|GO:0006355
Bva06g01108 216 Gene3D - 109 162 - -
Bva06g01108 216 Coils Coil 126 153 - -
Bva06g01108 216 Coils Coil 161 181 - -
Bva06g01108 216 Pfam bZIP transcription factor 110 168 IPR004827 GO:0003700|GO:0006355
Bva06g01108 216 CDD bZIP_plant_GBF1 111 159 IPR045314 GO:0003700|GO:0006355
Bva06g01108 216 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 113 128 IPR004827 GO:0003700|GO:0006355
Bva06g01108 216 PANTHER BASIC LEUCINE ZIPPER 43-RELATED 1 209 IPR044521 -
Bva06g01108 216 PANTHER BASIC LEUCINE-ZIPPER 70-RELATED 1 209 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g01108 Bva-Chr6 8852564 8853214 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g01108 98 213 bZIP Transcription Factor Family AT5G60830 51.695 2.21e-31 112
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Bva06g01108 bZIP_1 1.9e-11 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g01108 - - aprc:113874797 236.884
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g01108 06 8852564 8853214 Bva05g00595 05 2969067 2969740 BWGD
Bva06g01108 06 8852564 8853214 Bva06g01108 06 8852564 8853214 ECH