Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g01102 ATGATGAAGGTGAATCACGATGATTTTTATCCCAGCAACAGGGTGCGTCCCTGTGACACATGTAAAGTTGCTGCATCCACCCTTTACTGCCACACTGACTCTGCTTACCTCTGTGCTGCATGTGATGATCAAATCCATGCCATGGGGTCTCCCTGTTGGGCTCACCATCGTGTGCGGATTTGTGGTGCATGTGAGAATGCCCCAGCAGCTTTTACCTGCAAGGCTGATGCAGCATCACTGTGCATCAACTGTGACTTTGAAATTCACTCTGCCAACCCCATAGCCAGCCGCCACAGAAGGGTCCCAGTGTCACCACTGCCTCAATTGGTGAATGAGACCATAAATACTTGCACTGATGAGCTGACTTACTCAATGTTAGATGTGGGAAATGAGAAAAGTAACAAAGAAGTAGAAGAGCGTGAAGCTGACTCTTGGTTGTTGCTTGATGCTGACGCAAAAGATAGCCAGGCTGATGATACTTTCATGTTTGAAGAAGCAGCTGATCATGGGAACTTAGGTGCTGTAGAGTGGGATTCATCTACCAAGTTCCAGCGCCAGGACGAGTATAATCAGCAGCAACCTTGCAGCTTTTCTGAAGAGCTCGATGAAAGTGACAGTGTTGTTCCAATTCAATCACCTGAAGTGCAGTCACAGCAACAGCTGCAACAACAGCAAACTATCTACTTCAACATGGAGCACGAACCCTCAAGAGTGGCTTTCACTAACTATCCCCCAAGCTGTTGGAGTGTTCCAGTGCCCTTTATGGATGCCCACATTTTGCCAAGTGCGACGATAAGTAACATCTCAGGCTCTAGGTTTCCAAATCCTTCAGTTTCAATGCAATTCCACCTTGATCGTGAGATGAACAGGAAAGCAGGGGTTCTGAAAtacagagagaaaagaaagtcaaGGAAGTTTGAGAAGCGAATTCGATATGCCTATAGGAAAGCCTATGCTGATAAGAGACCAAGGGTGAAAGGCCGGTTTGCAAGGAGAGAAGAATTAACCTCATA 1013 0.458 MMKVNHDDFYPSNRVRPCDTCKVAASTLYCHTDSAYLCAACDDQIHAMGSPCWAHHRVRICGACENAPAAFTCKADAASLCINCDFEIHSANPIASRHRRVPVSPLPQLVNETINTCTDELTYSMLDVGNEKSNKEVEEREADSWLLLDADAKDSQADDTFMFEEAADHGNLGAVEWDSSTKFQRQDEYNQQQPCSFSEELDESDSVVPIQSPEVQSQQQLQQQQTIYFNMEHEPSRVAFTNYPPSCWSVPVPFMDAHILPSATISNISGSRFPNPSVSMQFHLDREMNRKAGVLKYREKRKSRKFEKRIRYAYRKAYADKRPRVKGRFARREELTS 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g01102 337 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 3 335 IPR045281 GO:0009909
Bva06g01102 337 ProSiteProfiles Zinc finger B-box type profile. 56 103 IPR000315 GO:0008270
Bva06g01102 337 PANTHER ZINC FINGER PROTEIN HD1-LIKE 3 335 - -
Bva06g01102 337 Pfam CCT motif 290 332 IPR010402 GO:0005515
Bva06g01102 337 CDD Bbox1_BBX-like 17 60 - -
Bva06g01102 337 Pfam B-box zinc finger 14 57 IPR000315 GO:0008270
Bva06g01102 337 Pfam B-box zinc finger 58 103 IPR000315 GO:0008270
Bva06g01102 337 ProSiteProfiles Zinc finger B-box type profile. 13 60 IPR000315 GO:0008270
Bva06g01102 337 CDD Bbox1_BBX-like 60 103 - -
Bva06g01102 337 SMART bboxneu5 56 103 IPR000315 GO:0008270
Bva06g01102 337 SMART bboxneu5 13 51 IPR000315 GO:0008270
Bva06g01102 337 ProSiteProfiles CCT domain profile. 290 332 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g01102 Bva-Chr6 8821812 8824752 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g01102 16 332 C2C2-CO-like Transcription Factor Family AT3G02380 41.212 7.92e-67 212
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-CO-like Bva06g01102 zf-B_box 5.6e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g01102 - - zju:107418912 289.656