Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g01101 ATGGGGTGCACATTTTCTGGATTGAATGCATTATACGATGCCGTTAATGGAGGTGGTGATGTCTGGATCAATGAGAATCGATTCCGCGTCGTGAGGCAGCTCGGGGAAGGTGGCTTTGCCTACGTCTACTTGGTCAAGGAGGTAATGGCCGACACATCCTCTGCCGGTGGTCTCGCTAAGAAGCTCAAAGACTCCTCTCATATATCTGATGATGGAACTTATGCTATGAAGAAGGTCCTCATTCAGAACAATGAACAGTTGGAATTAGTGAAGGAGGAGATCCGCGTTTCATCACTATTCAATCACCCAAATCTACTTCCACTTCTTGATCATGCAGTCATTTCTGTTAAGTCTACCCCAGAAACATCTTGGACCCATGAAGCATACTTACTATTTCCAGTTCATCTGGATGGAACATTGCTAGACAATGCCAAAACTAtgaaaaccaagaaagagcaaTATTCTACTTCAGATGTTCTTCAAATATTTCGGCAGCTTTGTGCAGGACTCAAGCATATGCACAGTTTAGACCCTCCTTATGCACATAATGATGTCAAACCTGGTAATGTTCTCATAACACATAGAAAGGGACAACCACCTCTGGCCATACTGATGGATTTTGGCAGTGCTCGACCTGCCAGGAGGCAAATTCGCACTAGAGCAGAGGCTCTACAGTtacagGAATGGGCATCTGAGCATTGCTCCGCTCCTTTCCGAGCCCCAGAACTGTGGGATTGCCCAAGCCATGCTGATATAGATGAGAGGACTGATGTTTGGTCACTCGGATGCACTTTGTATGCAATAATGTATGGAGTGTCTCCATTTGAATATGCCCTTGGAGAATCTGGAGGAAGTCTGCAGTTGGCCGTTGTAAATGCTCAGGTCAAATGGCCAGGTGGACCTAAGCCTCTATATCCAGAAGCTCTTCATCAGTTTGTTACGTGGATGCTTCAGCCCCAGGCCACTGTGAGGCCAAGGATAGATGATATCATAatccatgttgacaagttgaTTGCAAAGTTCTCTCGTTG 1031 0.4403 MGCTFSGLNALYDAVNGGGDVWINENRFRVVRQLGEGGFAYVYLVKEVMADTSSAGGLAKKLKDSSHISDDGTYAMKKVLIQNNEQLELVKEEIRVSSLFNHPNLLPLLDHAVISVKSTPETSWTHEAYLLFPVHLDGTLLDNAKTMKTKKEQYSTSDVLQIFRQLCAGLKHMHSLDPPYAHNDVKPGNVLITHRKGQPPLAILMDFGSARPARRQIRTRAEALQLQEWASEHCSAPFRAPELWDCPSHADIDERTDVWSLGCTLYAIMYGVSPFEYALGESGGSLQLAVVNAQVKWPGGPKPLYPEALHQFVTWMLQPQATVRPRIDDIIIHVDKLIAKFSR 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g01101 343 PANTHER SERINE/THREONINE-PROTEIN KINASE 16 1 342 - -
Bva06g01101 343 CDD STKc_16 27 339 - -
Bva06g01101 343 Pfam Protein kinase domain 67 333 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva06g01101 343 ProSiteProfiles Protein kinase domain profile. 28 338 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva06g01101 343 SUPERFAMILY Protein kinase-like (PK-like) 20 333 IPR011009 -
Bva06g01101 343 ProSitePatterns Protein kinases ATP-binding region signature. 34 61 IPR017441 GO:0005524
Bva06g01101 343 PANTHER - 1 342 - -
Bva06g01101 343 SMART serkin_6 28 338 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva06g01101 343 Gene3D Transferase(Phosphotransferase) domain 1 16 342 - -
Bva06g01101 343 ProSitePatterns Serine/Threonine protein kinases active-site signature. 180 192 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g01101 Bva-Chr6 8817343 8820993 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g01101 33 333 EF-hand Containing Proteins AT4G04710 24.839 8.08e-14 70.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK NAK Bva06g01101 Pkinase 1.9e-29 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g01101 K08856 - gmx:100803659 638.647
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g01101 06 8817343 8820993 Bva06g01101 06 8817343 8820993 ECH