Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g01100 ATGTCTGAGAAATTTCACTCTGTAAATGAAATCAGGTGCCCAGGGATGAAAATTCCAAGACCTGATTTCACGTCAATTGAGTTACCACTTACCAAACGCTTAATAATTCCAAAGCGTAATTACTTTCAGATAGGGAAAACCACATTATTCATTTCCGTAATGGCGCATACTAATTCTGGAGCTGAATCACCTCGGAGACGTTTGGGTCTATTGCGAGATCAGGTTCAACTAGTTAAAAGAAAGGACTCTGACCGCTATGAAATTGTTCCTATCCAAGATTCTTTGTCATTTGAGAAAGGTTTTTTCATAGTTATCCGTGCATGCCAATTGCTGGCTCAAAAGAATGACGGGATGATACTAGTAGGGGTTGCCGGTCCTTCTGGAGCAGGGAAAACTGTTTTCACTGAGAAGGTGCTCAATTTTATGCCGAGCATCGCTGTGATAACAATGGACAACTATAATGATTCTAGTCGAATTATAGATGGAAACTTTGACGACCCTCGCTTGACGGATTATGATGCCTTGCTCGAAAATATACAGGATCTGAAAGCAGGAAAACCAGTTGAGGTTCCAATATATGATTTCAAGTCGAGCTCTCGCATAGGTTACAGAACTGTAGAAGTCCCTAGCTCCCGTATTGTCTTCATAGAAGGCATCTATGCCTTAAGTGAAAAATTACGGCCTTTACTTGATCTTCGTGTGTCTGTCACTGGTGGAGTTCATTTTGACCTTGTCAAGCGTGTTTTGCGGGATATTCACCGTGCTGATCAAGAACCTGAAGAAATAATTCATCAAATCTCTGAAACGGTTTATCCAATGTATAAGGCTTTTATTGAGCCAGATCTCCAAACAGCgcatataaaaatcattaacaaGTTTAATCCATTCTCTGGATTCCAGAATCCCTCTTACATATTGAAGTCCACAAGAGCAGTGACAGCGGACCAAATCAAGGCTGTCATTGCTGAAGAGCATACTGAAACTAAAGAGGAAACATATGACATATATCTTCTACCGCCTGGGGAAGATCCTGAGGCATGTCAATCATATTTGAGAATGAGGAACCGGGATGGGAAGTACAACCTCATGTTTGAGGAATGGGTTACAGACAGTCCTTTCATAATATCACCTAGAATTACTTTTGAGGTCAGTGTGCGACTTCTTGGCGGTCTAATGGCCTTGGGGTACACAATCGCAGCTATCCTGAAAAGAAGCAGCCACGTCTTTCATGATGATAAAGTTTCTGTAAAAATTGATCGGCTAGAACAGCTTAATCGCTTATATGTTCAGgtTCAAGGAAAAGATCgaaattatgttaaatatgTGGCAGAGAAACTTGGGTTGGATGGTTCCTATGTACCTCGAACTTACATAGAACAAATTCAGCTAGAAAAGCTTGTAAATGATGTGATGACACTGCCAGATGATCTGAAGACAAAACTCAGTATAGAGGAGGATACAGTTTTGAGCCCCAAAGAAGCCCTTTCCAGAGCTTCAGCAGATAGGAGAATGAAATATCTTAGTCGTGGTGTCTCGCACTCATATTCAAACCAAAGGGATAAGAGTCTATCTAAGTTGACTAGACTAGCCATAAATAATAGAAGGTTTGATGGGAGATCTCTAGAATCACCTGCAGCAATTGCAAACCAAGGAGTCATTACCCAACTTTCTGATCAAATTTCCACTCTGAATGAGCGTATGGATGAGTTCACATCCCGTATTGAGGAGCTGAATTCAAAGTTTGCAGTCAGAAAAGTTTCGGCCAGTCAACAAAATTTGGCCCTACAGGCTGAAGCCTGCAACGGCTCAGGACCCACTTCTCTCTTTGTGGCTGGCTTGGGCAATGGTTCACTTTTACCtaattcttcttcatcttcccaATTGGCAAGGGAGTCCCCCCTGATGGAAGAGGTTTTACTTGTTGCGCGAGGACAACGCCAGATCATGCATCAATTAGACACGTTAAGCAGTCTTTTGCATGAGTATTTTGGAGAGAGGTCACGCCTTGGAAGAACTGGCCAAAGCAGAGTGCGTGAAGTTGACTCCATCACCATCTCGGCGGTCTTGACGACATTGGCCATTGGTGCCGTAGGTGTCTTTCTGTTCAAGGGTTTCACatcccaaaaata 2129 0.4138 MSEKFHSVNEIRCPGMKIPRPDFTSIELPLTKRLIIPKRNYFQIGKTTLFISVMAHTNSGAESPRRRLGLLRDQVQLVKRKDSDRYEIVPIQDSLSFEKGFFIVIRACQLLAQKNDGMILVGVAGPSGAGKTVFTEKVLNFMPSIAVITMDNYNDSSRIIDGNFDDPRLTDYDALLENIQDLKAGKPVEVPIYDFKSSSRIGYRTVEVPSSRIVFIEGIYALSEKLRPLLDLRVSVTGGVHFDLVKRVLRDIHRADQEPEEIIHQISETVYPMYKAFIEPDLQTAHIKIINKFNPFSGFQNPSYILKSTRAVTADQIKAVIAEEHTETKEETYDIYLLPPGEDPEACQSYLRMRNRDGKYNLMFEEWVTDSPFIISPRITFEVSVRLLGGLMALGYTIAAILKRSSHVFHDDKVSVKIDRLEQLNRLYVQVQGKDRNYVKYVAEKLGLDGSYVPRTYIEQIQLEKLVNDVMTLPDDLKTKLSIEEDTVLSPKEALSRASADRRMKYLSRGVSHSYSNQRDKSLSKLTRLAINNRRFDGRSLESPAAIANQGVITQLSDQISTLNERMDEFTSRIEELNSKFAVRKVSASQQNLALQAEACNGSGPTSLFVAGLGNGSLLPNSSSSSQLARESPLMEEVLLVARGQRQIMHQLDTLSSLLHEYFGERSRLGRTGQSRVREVDSITISAVLTTLAIGAVGVFLFKGFTSQK 709
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g01100 709 Coils Coil 553 580 - -
Bva06g01100 709 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 68 289 IPR027417 -
Bva06g01100 709 Pfam CYTH domain 323 457 IPR023577 -
Bva06g01100 709 Pfam Phosphoribulokinase / Uridine kinase family 121 289 IPR006083 GO:0005524|GO:0016301
Bva06g01100 709 Gene3D - 308 466 - -
Bva06g01100 709 CDD UMPK_like 120 292 - -
Bva06g01100 709 PANTHER URIDINE-CYTIDINE KINASE C-LIKE ISOFORM X1 58 698 - -
Bva06g01100 709 PRINTS Uridine kinase signature 241 251 - -
Bva06g01100 709 PRINTS Uridine kinase signature 118 135 - -
Bva06g01100 709 PRINTS Uridine kinase signature 277 290 - -
Bva06g01100 709 PRINTS Uridine kinase signature 185 200 - -
Bva06g01100 709 SUPERFAMILY CYTH-like phosphatases 313 460 IPR033469 -
Bva06g01100 709 Gene3D - 118 298 IPR027417 -
Bva06g01100 709 PANTHER URIDINE KINASE 58 698 - -
Bva06g01100 709 ProSiteProfiles CYTH domain profile. 301 463 IPR023577 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g01100 Bva-Chr6 8809842 8817408 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g01100 120 289 PRT Gene Family AT5G40870 25.698 9.40e-16 78.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g01100 K00876 - gmx:100803122 1106.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g01100 06 8809842 8817408 Bva06g01100 06 8809842 8817408 ECH