Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g01085 ATGCGTCTGTCCGATTCCGACGCTTTAGGTAAAACGATGGAGCCGATGGATATCGTTGGAAAATCAAAGGAAGACGCTTCACTTCCAAAAGAGTTTATAAACCTTGTCTCATCAGAGTCCAACGAAGTCTGTAGCAGAGAGGAGAAACGGACAATTGCACCTGAGCATGTATTGAAGGCTTTAGAGGTTCTTGGATTTGGTGAGTACATCGAGGAAGTTTATTCAGCATATGAACAGCACAAGATTGAGACTGTGCAGGACTCTTTAAAAGGTGGCAAGTGGAGCAATGGAGCTGAGATGACAGAGGAAGAAGCATTAGCAGAGCAGCAAAGGATGTTTGCGGAGGCACGTGCTAGAATGAACGGTGGGGCTATTGCTTCCAAGCAGCCAGATGCTGACCAAAGTTTAGAGAGCTA 416 0.4591 MRLSDSDALGKTMEPMDIVGKSKEDASLPKEFINLVSSESNEVCSREEKRTIAPEHVLKALEVLGFGEYIEEVYSAYEQHKIETVQDSLKGGKWSNGAEMTEEEALAEQQRMFAEARARMNGGAIASKQPDADQSLES 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g01085 138 SUPERFAMILY Histone-fold 30 125 IPR009072 GO:0046982
Bva06g01085 138 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 30 61 IPR003958 -
Bva06g01085 138 Gene3D Histone, subunit A 25 125 IPR009072 GO:0046982
Bva06g01085 138 PANTHER PROTEIN DR1 HOMOLOG 31 137 IPR044255 -
Bva06g01085 138 MobiDBLite consensus disorder prediction 1 23 - -
Bva06g01085 138 PANTHER PROTEIN DR1 HOMOLOG 31 137 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g01085 Bva-Chr6 8742750 8746535 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g01085 13 134 CCAAT-DR1 Transcription Factor Family AT5G23090 62.338 3.72e-62 186
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Bva06g01085 CBFD_NFYB_HMF 2.5e-07 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g01085 K21751 - tcc:18604965 220.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g01085 06 8742750 8746535 Bva06g01085 06 8742750 8746535 ECH