Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g01066 ATGTCATCGAGTGCAGGTGAAACCCTTTGGAGctatgaagaagagaagacaTTTGAGAATGCCATCGCTACGCATTGGATTGATGAAGACTCAAAGGAGCATTGGGAGAAGATTGCTTCAGCAGTTCCCAACAAGAGCACGGAGGAAGTGAAGCAACATTACCAGTTGCTAGTAGAGGATATAAGTGCAATAGAGGCTGGGCATATACAACTTCCCAACTATGTTGGAGAGGAAACCACATCTTCAAACAAAGATTCTCATGGTTCTTCCAAGGCTTCGGCTGCAGATAAGAGATCCAATGGTAATTATGGAAGTGGGTTTTCAGGTTCAGGTCATGATTCCACTGGTAAAGGAAGCTTGTCAAGGTCTTCAGACCAAGAAAGGCGAAAAGGGATTCCATGGACAGAAGAAGAGCACAGGTTATTTCTGCTTGGTCTTGATAAGTTTGGAAAGGGGGATTGGCGAAGCATTTCAAGGAACTTTGTGATTTCTAGGACTCCAACTCAAGTGGCAAGCCATGCACAGAAATACTTTATTCGGTTAAACTCAATGAACAGAGATAGAAGAAGGTCTAGCATCCATGACATTACAAGTGTCAACAATGGAGACATGGCTGGTAATCAGGCACCAATTACAGGGCAACATGGCAACACAAACCCATCAAACGCCATAGCTGTAGGACAATCATTGAAGCATAGAACTCAGCCGTACATCGCTCCTGGTTTAGGCATGTGTGCCACTCCCATGGGCCATCCAGTGGCTGCTCCTCCTGGGCATGTGGCATCTGCTGTTGGAACTCCTGTCATGCTCCCACCAGGGCCTCACCCCCCTTATGTTCTCCCGCCACTTGCTTACCCAATGGCACCTCCAACAATGCACCAATA 884 0.4581 MSSSAGETLWSYEEEKTFENAIATHWIDEDSKEHWEKIASAVPNKSTEEVKQHYQLLVEDISAIEAGHIQLPNYVGEETTSSNKDSHGSSKASAADKRSNGNYGSGFSGSGHDSTGKGSLSRSSDQERRKGIPWTEEEHRLFLLGLDKFGKGDWRSISRNFVISRTPTQVASHAQKYFIRLNSMNRDRRRSSIHDITSVNNGDMAGNQAPITGQHGNTNPSNAIAVGQSLKHRTQPYIAPGLGMCATPMGHPVAAPPGHVASAVGTPVMLPPGPHPPYVLPPLAYPMAPPTMHQ 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g01066 294 PANTHER TRANSCRIPTION FACTOR KUA1 8 293 - -
Bva06g01066 294 Gene3D - 1 71 - -
Bva06g01066 294 CDD SANT 133 178 IPR001005 -
Bva06g01066 294 SUPERFAMILY Homeodomain-like 128 183 IPR009057 -
Bva06g01066 294 MobiDBLite consensus disorder prediction 76 132 - -
Bva06g01066 294 SMART sant 6 60 IPR001005 -
Bva06g01066 294 SMART sant 130 180 IPR001005 -
Bva06g01066 294 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 130 180 IPR006447 GO:0003677
Bva06g01066 294 PANTHER TRANSCRIPTION FACTOR MYBS1 8 293 - -
Bva06g01066 294 ProSiteProfiles Myb-like domain profile. 2 58 IPR001005 -
Bva06g01066 294 SUPERFAMILY Homeodomain-like 9 63 IPR009057 -
Bva06g01066 294 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 125 182 IPR017930 -
Bva06g01066 294 Gene3D - 132 184 - -
Bva06g01066 294 Pfam Myb-like DNA-binding domain 10 56 IPR001005 -
Bva06g01066 294 Pfam Myb-like DNA-binding domain 133 178 IPR001005 -
Bva06g01066 294 ProSiteProfiles Myb-like domain profile. 126 178 IPR001005 -
Bva06g01066 294 ProSiteProfiles SANT domain profile. 5 54 IPR017884 -
Bva06g01066 294 MobiDBLite consensus disorder prediction 76 121 - -
Bva06g01066 294 ProSiteProfiles SANT domain profile. 134 182 IPR017884 -
Bva06g01066 294 CDD SANT 10 58 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g01066 Bva-Chr6 8641762 8643460 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bva06g01066 Myb_DNA-binding 1.2e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g01066 - - gmx:778049 446.432
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g01066 06 8641762 8643460 Bva06g01066 06 8641762 8643460 ECH