Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g01060 ATGGCTCCTCCGTGGGTTCAAGAGCTCCATCTCCTTCACTTGAACCTATCCGTTACTATTGATAATATGTTCTCGGTCAGACCCTCAAGGCCTATTCCAGTTAAACCCGGGGACACTCTTTACCTTTCCAACCTTGATGACATGATCGGAGCGCGTGTATTTACACCTACAGtgtatttttatcaatcagaTGAATTGAGTTTCTGCCAAAAATCTGTAGTCAAAACACTGCGTGATGCTCTTGCAGATGTGTTAGTTCCTTATTACCCTCTTTCAGGCAGGCTTAGAGAGACCAATAATGGGAAGCTGGAAGTGTTTTTTGGACCAGATCAAGGGGCACTCATAGTTGAAGCGCACTCTGATATGACCTTGGCTGAATTAGGAGACCTCATAGCCCCAAACCCAGCTTGGGAACCATTGATATTCAAGTTCCACAACGAAGAACAATACAAAGTTCTTGACATGCCATTGCTTATTGCTCAAGTTACCCTTTTCCGCTGTGGTGGATTCAGCCTTGGGTTGAGGCTCTGCCACTGCATCTGTGATGGGCTTGGAGCTATGCAGTTCCTAGGTGCATGGTCTGCCACGGCAAAGACAGGGAGAGTGGTCACAGACCCTGTACCCTGTTGGGACAGGGAAATGTTTCGGCCACGCAACCCACCCACGGTCAAATTCCCCCACATGGAGTTCATGAGAATCGACGAAGGCTCCAATTTGACCATGAAACTATGGCAAACCAAGCCTGTTCAGAAATGTTACAGAATCAGCCGTGAGTTTCAAAATTGGCTAAAAGCTCTTGCTCAACCATATGACGATACTGGCTGCACAACCTTCGATGCCATGGCAGCACATATTTGGAGGTCATGGGTGAAAGCCCTTGAAGTAAGACCACTAGATTACCAGCTCCGGCTGACATTTTCAGTCAATGCTCGGCAGAAACTCAGAAACCCAACATTGAAAGATGGGTTTTACGGCAATGTGGTTTGCGTGGCTTGTGCAACATGCTCTGTGGCAGAGCTGCTGAATGAGCAGCTCCCAGCCACCACCTGCTTGGTTCGCGAAGCCAGAAACAGTGTCTCCGAGGAGTATTTGAGATCTACAGTGGATTATATTGAAGTGGATAGGCCAAGACAACTGGAGTTTGGAGGAAAATTGACAATAACACAGTGGACTAGGTTCTCAATATACAAGTCTACAGATTTTGGGTGGGGCAAGCCAGTGTATGCCGGTCCTATCGATCTCACGCCCACGCCACAGGTTTGTGTGTTCCTACCAGAAGGGGATGCTGATTGTAGTGATTCAATGATAGTGTGCATCTGCTTACCCGAGTCTGCTGTTCAAGAGTTTACACGAAGCTTGTTTCTGGATACAGAGTTGACAGACACAAACCTCTTGCTAATTAATCTCATGTG 1412 0.4674 MAPPWVQELHLLHLNLSVTIDNMFSVRPSRPIPVKPGDTLYLSNLDDMIGARVFTPTVYFYQSDELSFCQKSVVKTLRDALADVLVPYYPLSGRLRETNNGKLEVFFGPDQGALIVEAHSDMTLAELGDLIAPNPAWEPLIFKFHNEEQYKVLDMPLLIAQVTLFRCGGFSLGLRLCHCICDGLGAMQFLGAWSATAKTGRVVTDPVPCWDREMFRPRNPPTVKFPHMEFMRIDEGSNLTMKLWQTKPVQKCYRISREFQNWLKALAQPYDDTGCTTFDAMAAHIWRSWVKALEVRPLDYQLRLTFSVNARQKLRNPTLKDGFYGNVVCVACATCSVAELLNEQLPATTCLVREARNSVSEEYLRSTVDYIEVDRPRQLEFGGKLTITQWTRFSIYKSTDFGWGKPVYAGPIDLTPTPQVCVFLPEGDADCSDSMIVCICLPESAVQEFTRSLFLDTELTDTNLLLINLM 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g01060 470 PANTHER F21B7.2 12 455 - -
Bva06g01060 470 Pfam Transferase family 17 450 - -
Bva06g01060 470 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 12 455 - -
Bva06g01060 470 Gene3D - 15 232 IPR023213 -
Bva06g01060 470 Gene3D - 237 453 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g01060 Bva-Chr6 8621196 8622608 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g01060 16 454 Monolignol Biosynthesis Gene Families AT5G48930 30.820 4.40e-55 188
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g01060 K15400 - gmx:100802814 787.719
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g01060 06 8621196 8622608 Bva06g01060 06 8621196 8622608 ECH