Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g01050 ATGGCGGTGGTTTTTGCCGCTTGGAGAGTGATGATTGTGGTCTTCGTTTTGGTTCTGCGGCTGAGTTGGCGAGTCAGAACGGAGCCGACCCAGGACAAGCAAGCCCTCATCGCTTTTATCTCTCAAACACCACATGCTAATCGTATTAAGTGGAACGCTTCCGACTCGGCCTGCAACTGGGTGGGAGTAGAATGCGATGCTGCGCgttcctttgttttttctcttcgTCTTCCTGGTGTTGGCCTTGTGGGTCGTATTCCGCCTAACACAATCGGCCGTCTCACTCAGCTGCGAGTTCTCAGTCTCCGTTCTAACGGTCTCATCGGTGAGATCCCTGCCGACTTTTCCAATTTGACGTTACTTCGCAGCCTCTACCTTCAGCATAACCAGCTCTCCGGCGAGTTTCCCGCCTTGCTGACTCGGTTGACTCGATTGATAAGGCTGGATATTTCTTCAAACAACTTAACTGGTAAAATCCCTTTCTCCATCAACAATCTGACCCACTTGAGTGGTCTTTTCTTGGAAAACAACAGATTCTCTGGTAACCTGCCAAGCATTACAGCCAATTTGGTAGACTTCAATGTCTCCCATAACCAGCTTAACGGTTCGATCCCTGAAACCCTTTCGAAATTCCCTGCATCCTCATTCGCCGAAAACTTAGATCTCTGTGGAGGACCATTGCAACCATGTAACCCATTCTTTCCAGCTCCAGCTCCATCGCCGTCCTCCATTGTACCCATGCCCCCAGTTCATAAGAAGTCTAAGAAGCTTTCAACAGCTGCCATTATCGGAATTTCAGTTGGTTGTgctttgtttctcttgttATTACTGCTCCTTCTCTTTCTATGTCTCTGGAAGCGCCAGCGTCAGCAACCCGCGAAGCCGCCGAAGCCAGTGGCAACAGCTCGTGCTGCACCGGCAGAGGTTGGCACCTCATCTTCGAAAGATGACATCACAGGTGGGTCTGTGGAGGCCGAGAGAAACAGGCTGGTGTTCTTCGAAGGtggaatttataattttgatttggaaGATTTGCTGAGGGCTTCAGCGGAAGTTTTGGGGAAGGGAAGCGTGGGTACTTCTTACAAGGCCGTGTTGGAGGAGGGGACCACCGTGGTGGTGAAGAGGTTGAAGGATGTAGCCGTTCCAAAGAGAGAGTTCGAGACGCAAATGGAGGTTCTGGGAAAGATTAAGCACGAGAATGTGGTTCCTCTAAGAGCATTTTACTACTCTAAGGACGAGAAATTGCTAGTTTACGATTACATGTCTTCTGGTAGCTTGTCTGCTCTGCTTCACGGGAGCAGGGGGTCGGGGCGGACACCGCTGGATTGGGATAGCCGGATGAGAATAGCGCTAGGAGCCGCGAGAGGTCTGGCCCACCTACACGTGTCCGGAAAAGTGGTCCACGGCAATATAAAATCTTCGAACATCCTCCTCAAAACTGACCACGAAGCTAGCGTTTCGGACTTCGGGCTGAACCCGTTATTTGGCAATTCGACTCCAACCAACCGGGTGGCAGGCTATCGGGCCCCCGAGGTTTTGGAAACCCGCAAAGCGACGTTCAAGTCCGATGTTTACAGCTTCGGTGTACTGCTGTTGGAACTATTAACGGGGAAGGCACCGAATCAAGCTTCGTTGGGCGAAGAGGGAATTGATCTTCCTAGGTGGGTCCAATCCGTGGTTCGCGAAGAATGGACTGCCGAGGTGTTCGACGCAGAGCTTATGAGGTACCACAATATTGAGGAAGAGATGGTCCAGCTATTACAGATAGCGATGACTTGTGTTTCGGTGGTACCCGATCAAAGACCGAGCATGCAAGAGGTGGTCCGTATGATGGAGGATATGAACAGAGGCGAAACCGACGATGGCTTACGACAGTCGTCCGATGATCCATCCAAAGGATCGGACGGTCAGACGCCACCTACCGAGTCAAGGACTCCACCGAGCGCTGTCACACCGTA 1961 0.5018 MAVVFAAWRVMIVVFVLVLRLSWRVRTEPTQDKQALIAFISQTPHANRIKWNASDSACNWVGVECDAARSFVFSLRLPGVGLVGRIPPNTIGRLTQLRVLSLRSNGLIGEIPADFSNLTLLRSLYLQHNQLSGEFPALLTRLTRLIRLDISSNNLTGKIPFSINNLTHLSGLFLENNRFSGNLPSITANLVDFNVSHNQLNGSIPETLSKFPASSFAENLDLCGGPLQPCNPFFPAPAPSPSSIVPMPPVHKKSKKLSTAAIIGISVGCALFLLLLLLLLFLCLWKRQRQQPAKPPKPVATARAAPAEVGTSSSKDDITGGSVEAERNRLVFFEGGIYNFDLEDLLRASAEVLGKGSVGTSYKAVLEEGTTVVVKRLKDVAVPKREFETQMEVLGKIKHENVVPLRAFYYSKDEKLLVYDYMSSGSLSALLHGSRGSGRTPLDWDSRMRIALGAARGLAHLHVSGKVVHGNIKSSNILLKTDHEASVSDFGLNPLFGNSTPTNRVAGYRAPEVLETRKATFKSDVYSFGVLLLELLTGKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDAELMRYHNIEEEMVQLLQIAMTCVSVVPDQRPSMQEVVRMMEDMNRGETDDGLRQSSDDPSKGSDGQTPPTESRTPPSAVTP 653
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g01050 653 PANTHER OS05G0480400 PROTEIN 12 633 - -
Bva06g01050 653 SUPERFAMILY L domain-like 51 231 - -
Bva06g01050 653 MobiDBLite consensus disorder prediction 613 629 - -
Bva06g01050 653 ProSiteProfiles Protein kinase domain profile. 347 615 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva06g01050 653 Gene3D Transferase(Phosphotransferase) domain 1 422 633 - -
Bva06g01050 653 MobiDBLite consensus disorder prediction 613 653 - -
Bva06g01050 653 Gene3D Ribonuclease Inhibitor 188 233 IPR032675 -
Bva06g01050 653 MobiDBLite consensus disorder prediction 630 653 - -
Bva06g01050 653 PANTHER OS05G0588300 PROTEIN 12 633 - -
Bva06g01050 653 Pfam Leucine rich repeat N-terminal domain 30 66 IPR013210 -
Bva06g01050 653 SUPERFAMILY Protein kinase-like (PK-like) 351 612 IPR011009 -
Bva06g01050 653 Gene3D Phosphorylase Kinase; domain 1 315 421 - -
Bva06g01050 653 CDD STKc_IRAK 353 615 - -
Bva06g01050 653 Gene3D Ribonuclease Inhibitor 29 187 IPR032675 -
Bva06g01050 653 MobiDBLite consensus disorder prediction 292 320 - -
Bva06g01050 653 Pfam Leucine rich repeat 84 131 IPR001611 GO:0005515
Bva06g01050 653 Pfam Protein kinase domain 350 610 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva06g01050 653 Pfam Leucine Rich Repeat 144 166 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g01050 Bva-Chr6 8552495 8555941 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g01050 5 636 Receptor kinase-like Gene Family AT5G58300 53.510 0.0 635
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Bva06g01050 Pkinase 5.2e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g01050 - - cpap:110818580 991.49
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g01050 06 8552495 8555941 Bva06g01050 06 8552495 8555941 ECH