Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g01048 atggcatCTTCATCCGAACTAAGCCTGGATTACAAACCCCATAGCTATTCCATGCTACTCAAATGTTTTGGAGATCAGCAGAGTGAACAGACCTACAAGCTCGAAGAATACCTTTCTTGCCTAGAGGAAGAACGTCTCAAGATTGATGCCTTCAAGCGAGAGCTTCCTCTCTGCATGCAACTTCTTTCCAACGCTATGGAGGGTTTAAGGCAGCAACTGCAGGCTTTTAGGGGAAATCAAGGCACAAAGCCAGTTCTTGAGGAATTCATACCCATAAAGCATTCAACCTCTGAAAGCTCTGAAAAGGCACCAAACATGTCTGACAAGGCAAACTGGATGACATCTGCTCAACTATGGAGCCAAGCAAGTGAAGGAAGCAAGCAACAATCGACAATCACATCACCTAAAGAATCTGATATTGGCTTTAACGTTAGCCCTAAGCTAGCTTTAGACAACAAACAGAGGAATGGTGGAGCcttccttccattttcaaaagaaagaaactcgTGCCCTAGCTCTGCATTGCGGGCTCTCCCCGAGCTTGCTCTTGCCTCTGCTGAGAAAGAAATGGAGGACAAGAAATCTGCAGAGCATGAAAATGGAGCATCATGTCCAAAGAGGGATAACTCTGGGAAAGGAGGCAATGGTGGGGTGGTGATTGATCAAGGAAAAGGATCTGCAGCAGAATCTGAGCCACAAACAACCAACACTAACAATAGCACAAATGCTACACAAACACATAGGAAAGCAAGAAGGTGCTGGTCACCAGACTTGCACCGCAGATTTGTGAACGCTCTTCAAATGCTTGGTGGATCTCAAGTGGCCACACCAAAACAAATCAGAGAGCTGATGAAGATTGACGGTTTGACCAATGATGAAGTTAAAAGCCATCTTCAGAAATATAGGCTTCACACTAGACGACCCAGTCCAAGCCCACAAGCAGGCGGAGCACCCGCGCCACAGCTCGTAGTTCTAGGAGGGATTTGGGTCCCACCGGAGTATGCCAcggcagcagcagcagccacCCCTGCCCTCTATGGCCCACACCATACCTCCCATGCACCACCCCCACACTATTGCACTGCCACCCCTGTGCCCCAAGACTTTTACACTGCTACCCCGTCGCAGTCACCGCTGCCACCGCAACCGCACAACCACGCGCTCCATCACCACCTCCACATGTACAAAACGGCGTCACAAAACCACACCTCGCCGGAATCTGACGTTCGTGGAGCCGGCGACCGTTCGGAAAGTATCGAAGACGGCAAATCCGAAAGCAGCAGTTGGAAGGGGGAGAGTGGTGAGAACGAAGGAGACAGAAAAGGATTGGCCACCCTTAGAGATCAAGATGGGGAGGACAGTAATGGGAGTGACATCACTCTCAAATTTTA 1391 0.4745 MASSSELSLDYKPHSYSMLLKCFGDQQSEQTYKLEEYLSCLEEERLKIDAFKRELPLCMQLLSNAMEGLRQQLQAFRGNQGTKPVLEEFIPIKHSTSESSEKAPNMSDKANWMTSAQLWSQASEGSKQQSTITSPKESDIGFNVSPKLALDNKQRNGGAFLPFSKERNSCPSSALRALPELALASAEKEMEDKKSAEHENGASCPKRDNSGKGGNGGVVIDQGKGSAAESEPQTTNTNNSTNATQTHRKARRCWSPDLHRRFVNALQMLGGSQVATPKQIRELMKIDGLTNDEVKSHLQKYRLHTRRPSPSPQAGGAPAPQLVVLGGIWVPPEYATAAAAATPALYGPHHTSHAPPPHYCTATPVPQDFYTATPSQSPLPPQPHNHALHHHLHMYKTASQNHTSPESDVRGAGDRSESIEDGKSESSSWKGESGENEGDRKGLATLRDQDGEDSNGSDITLKF 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g01048 463 MobiDBLite consensus disorder prediction 119 139 - -
Bva06g01048 463 MobiDBLite consensus disorder prediction 186 205 - -
Bva06g01048 463 MobiDBLite consensus disorder prediction 227 249 - -
Bva06g01048 463 MobiDBLite consensus disorder prediction 408 457 - -
Bva06g01048 463 Pfam Myb-like DNA-binding domain 251 302 IPR001005 -
Bva06g01048 463 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 246 306 IPR017930 -
Bva06g01048 463 Gene3D - 248 306 - -
Bva06g01048 463 Coils Coil 59 79 - -
Bva06g01048 463 MobiDBLite consensus disorder prediction 365 463 - -
Bva06g01048 463 MobiDBLite consensus disorder prediction 186 253 - -
Bva06g01048 463 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 249 304 IPR006447 GO:0003677
Bva06g01048 463 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 463 IPR044787 GO:0003700|GO:0006355
Bva06g01048 463 PANTHER MYB-LIKE TRANSCRIPTION FACTOR FAMILY PROTEIN 1 463 - -
Bva06g01048 463 SUPERFAMILY Homeodomain-like 246 307 IPR009057 -
Bva06g01048 463 Coils Coil 34 54 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g01048 Bva-Chr6 8538960 8541981 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g01048 1 463 G2-like Transcription Factor Family AT2G03500 51.245 1.39e-134 393
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Bva06g01048 Myb_DNA-binding 1e-05 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g01048 - - qsu:112031181 670.233
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g00648 05 3236538 3239169 Bva06g01048 06 8538960 8541981 BWGD
Bva06g01048 06 8538960 8541981 Bva06g01048 06 8538960 8541981 ECH