Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g01045 ATGGGTTCCTatgattcttcttcttccttctcctcCTCTGGAACCAAGAACATGGCAGAAATCGATGGTCTTCTCGCCGGCGCCGGCTACAAGGTTAAGTCCTCCGATCTTCATCAAGTTGCTAGACGCCTCGAACGCCTTGAGAATGCCATGGTTAATTCCGCCGCTGACATTTCTCAACTAACTTCCGATACCGTACACTACGACCCCTCGGACATCGCCTCCTGGGTTGATACCCTTCTCTCCGAGTTGAACCATACCGTTTCTTTACCCTCTGATCTCGTGGAACTCTCTGATCTCCCCACAGGTCCTCCTCTCAATCAAACGGCTCTCGATACCGATTggataaatcataaatatatattgccTCAGCATCAGCACCGCCGTAATGCTTCTCAGCCACACCAACACCAGCACCAGCAATTGACGGTGGTGGCATCGTTGGAAGAAGACTCTGGGATAAGGCTGGTTCACATGCTCATGACATGCGCTGATTCTCTGCAACGCGGCGAGCTGCCACTCGCTGGTTCGTTGATTGAGGACATGCAGGCCTTGTTGAGGCATGTCAACACCGCCTGCGGTATCGGAAAAGTCGCCGGCTGCTTCATCGACGCTCTAAGTCGCCGGATCTTCGCCCCGCAACACCTGGTTCAGGGCATTGGCTCCTGTACCGGTTCGCCTTTCGAGAACGAGGTTCTGTACCATCACTATTACGAGGCTTGTCCCTATTTCAAATTTGCTCACTTCACCGCCAACCAGGCTATCCTGGAAGCTTTCAACGGTCACGATTCCGTCCACGTCATCGACTTCAACCTCATGCACGGCCTTCAATGGCCGGCTCTCATACAGGCTCTGGCGCTGCGTCCCGGCGGGCCTCCCTTGCTGCGGTTGACTGGCATTGGCCCACCCTCACCCGACGGTCGTGACACGTTACGGGAAATCGGCCTGCGACTCGCCGAGTTAGCCCGGTCCGTCAATGTTCGGTTCGCATTCCGCGGCGTCGCGGCTTCCAGGCTCGAGGACGTCAAGCCGTGGATGCTCCAGATCAATCCAAAAGAAGCCGTGGCGGTCAACTCCATCATGCAGCTCCACAGGCTTCTCGGGTCTGACTCGACTCCCGATTCTTCTGCGGGCTCAGCAATCGAAGTGGTCCTCGGATGGATCCGAAGCCTCAACCCGAAAATCATGACGCTGGTGGAGCAAGAAGCAAACCATAACCAACCCGGATTCTTGGACCGCTTCACGGAAGCTCTCTATTATTACTCAACCCTGTTTGATTCGCTGGAGGCTTGCTCGCTCCAGCCGGATAAAGGTTTCGCCGAGATGTACATACAGAGGGAGATATGCAACGTGGTGTGTTGCGAGGGACCGGCTCGGGTGGAGAGGCACGAGCCACTGGCTAAATGGAGGGATCGGTTTGGAAAAGCCGGGTTTAAACCTCTGCGTTTGGGGTCCAATGCGTTCAAACAGGCGAGCATGCTGCTGAATCTGTTCTCGGCGGAGGGTTATTGCGTGGAAGAGAACGAAGGGTGTTTGACGTTGGGGTGGCACAGCCGTCCTCTGATAGCGGCTTCGGCTTGGCAAGCCGTACCAGAGCGAAACGCTGCGTTTGAACCAGTAACAAGTGTTGTTTG 1634 0.5398 MGSYDSSSSFSSSGTKNMAEIDGLLAGAGYKVKSSDLHQVARRLERLENAMVNSAADISQLTSDTVHYDPSDIASWVDTLLSELNHTVSLPSDLVELSDLPTGPPLNQTALDTDWINHKYILPQHQHRRNASQPHQHQHQQLTVVASLEEDSGIRLVHMLMTCADSLQRGELPLAGSLIEDMQALLRHVNTACGIGKVAGCFIDALSRRIFAPQHLVQGIGSCTGSPFENEVLYHHYYEACPYFKFAHFTANQAILEAFNGHDSVHVIDFNLMHGLQWPALIQALALRPGGPPLLRLTGIGPPSPDGRDTLREIGLRLAELARSVNVRFAFRGVAASRLEDVKPWMLQINPKEAVAVNSIMQLHRLLGSDSTPDSSAGSAIEVVLGWIRSLNPKIMTLVEQEANHNQPGFLDRFTEALYYYSTLFDSLEACSLQPDKGFAEMYIQREICNVVCCEGPARVERHEPLAKWRDRFGKAGFKPLRLGSNAFKQASMLLNLFSAEGYCVEENEGCLTLGWHSRPLIAASAWQAVPERNAAFEPVTSVV 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g01045 544 PANTHER OS05G0574900 PROTEIN 4 532 - -
Bva06g01045 544 Pfam Transcriptional regulator DELLA protein N terminal 22 87 IPR021914 -
Bva06g01045 544 SMART DELLA_2 22 94 - -
Bva06g01045 544 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 4 532 IPR005202 -
Bva06g01045 544 ProSiteProfiles GRAS family profile. 147 528 IPR005202 -
Bva06g01045 544 Gene3D - 20 84 IPR038088 -
Bva06g01045 544 Coils Coil 37 64 - -
Bva06g01045 544 Pfam GRAS domain family 156 528 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g01045 Bva-Chr6 8517851 8519830 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g01045 21 528 GRAS Transcription Factor Family AT1G14920 48.571 6.09e-163 472
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Bva06g01045 GRAS 1.4e-123 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g01045 K14494 - jre:109006296 777.319
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g01045 06 8517851 8519830 Bva06g01045 06 8517851 8519830 ECH