Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g01037 ATGGTCTTTATGTGCGGGGAAGATGAGGTTGATGAGTTGTCGAGAGATGGCAGCCACTATAGTCTTACCACTGGCATATTGCCTTCCCTTGGAGCCGGAAGCAACCACAGAATAAAGCTTAGAAACTTCATTATATCCCCTTATGACCGTCGTTACAGGGTATGGGAGACTTTCCTTGTTATTCTGGTCATCTACACTGCCTGGGTGTCTCCATTTGAATTTGGATTCCTTAAGAAACCAGCAGTACCACTCTCCATCATTGACAATGTTGTTAATGGATTCTTTGCTGCGGATATAGTTGTTACCTTTTTTGTTGCTTACCTTGACAAAACTACCTACTTGTTGGTTGATAACCCAAAAAAGATTGCCCGGAAATATGCAATTTCTTGGTTGGCCTTTGATGTTGTCTCTATCATTCCTTCAGAGCTTGCTCGCAAAATTTTACCTTCGCCGCTCCGTTTCTATGGCCTATCCAACATGCTTCGCCTTTGGCGTCTCCGAAGAGTCAGTGCACTATTTAGTAGATTGGAGAAAGACAGAAACTTTAACTATTTCTGGGTTCGATGTGCCAAGCTCATATGTGTTACGTTTTTTACCGTTCACTGTGCTGCATGCTTCTACTATCTCATCGCTGCAAGTTATCATGATCCTAAAAGAACTTGGGTTGGAATAACAATGGACAACTTCCTTGAACAAAGCTTGTCGACTCAATACATCACATCAGTTTACTGGTCTATTACCACCTTAACCACTGTTGGCTATGGGGATTTGCATCCTGTGAATTCAATGGAGATGCTATTTGACATCTTTTTCATGCTTTTTATTCTTGGATTGACATCATATTTGATTGGCAATATGACCAACTTAGTTGTCCACTGCACAAGTCGAACTAGAAAATTTAGGGATACCATACACGCTGTCTCAAGTTTTGTACAAAGGAACAAGTTGCCTGTTCGGTTGCAAGAGCAGATTATTCAACATTTGTGTTTGAAGTTCAGAACTGACGTAGAGGGATTGCAGCAGCAAGAGATCCTTAATTCTCTTCCTAAAGCTATTAGATCAAGCATTTCGCATCATCTTTTTTACAATCTTCTGGACAATGTTTACTTGTTCCGTGAGGTTTCAAAGGacttgatttttcaattgGTCTCAGAGATGAATGCTGAGTACTTTCCTCCCAGTGAAGATGTGATCTTGCAGAACGAAGCCCCCACAGACTTCTATTTACTAGTCTCCGGTGTTGTGGTTATTGGATCAGCCAAAACTGGTGACCTCTGCGGTGAAATTGGGGTGCTTTGTTGTAAGCCACAGCTCTTTACAGTGCGAACCAAGCGTCTAAGCCAGCTACTGAGATTCAACCGTACTACTTTTATGAACATTGTTGAAGCCAACGTAGGAGATGGGACCATAATCTTAAGCAATCTCATTCAGCATTTGAAAGAGCTCAAGCATCCTCTGGTGGAGACAATTTTAGTTGAGATGGAGAAAATGTTAGCTCGTGGCAGAATGGACCTACCACTAAGTCTCTGCTTTGCAGCACTCAGGGAAGATGACTTCTTGTTGAATCAACTGCTAAAACGTGGTTTGGACCCAAATGAATCTGACAAAGATGGAAGAACCGCTTTGCATATTGCAGCATCTAAAGGAAACGATAAGTGTGTGATGCTTCTGTTGAATTTTGAAGCAGATCCCAACATCGAAGATTCCTATGGAAATGTGCCACTATGGGAGGCTATGCTAGGTGGACATGAGTCAGTGATAAACCTCTTAATAGACAATGGTGCTCACTTGCAATATGGAGATGCAGGTCAATTTTCATGCACTGCCACTGAACAAAATAATCTCGAGTTGCTTAGGGATATTGTTCGCTATGGAGGAGATGTTACACTTAGTATTAGCAATGGGAGCACCGCTCTGCATGTTGCAGTAAGTGAAGGCAACACCCAGATAGTGAAGTTCCTCTTGAATCATGGGGCAGATATTGACAAGGCAAACATCCATGGTTGGACGCCTAGAGATCTAGCAGACCAACAAGGACAAGAGCATATAAAAACCATTTTTGAATCCTTTGGAGAGCCCAAGGTTCAATCTGTTATTTCAATGCAGGGTAGGATTGAGCCAACGATGCCATTGTGCAAGGAAGGCTCTTTTCTAGGAACTGACGGATCATCTAACGAAAGCTGCCCAAGAAAGAGTAATAATATCTTTCAGAACTCAATATTTAGGGTGATGTCAGCGGCTCACAAAGGAGAGAAGGACTCACTATTCCCtgttaacattaaaaataccaGAAGCATGAAAGATGGTGATTGTACAGTTAGAGTAACAATTAGTTTCCCAGAAAAGGGTCATGGTGTGAAGCTTGTGCTGCTGCCAAGGACTTTCAAGGAGCTACTCGCGATTGGAGCAAATAAATTTGGTGCATTTCCTACAAAGATTGTGAACAAAGATGGAGCTGAAATTGATAACATAGAGGTGATTAGAGACGGTGATCATCTTATTTTTGTCAGTGCCACACCAGAATCCATTTGTTTGAATGGatattg 2546 0.4144 MVFMCGEDEVDELSRDGSHYSLTTGILPSLGAGSNHRIKLRNFIISPYDRRYRVWETFLVILVIYTAWVSPFEFGFLKKPAVPLSIIDNVVNGFFAADIVVTFFVAYLDKTTYLLVDNPKKIARKYAISWLAFDVVSIIPSELARKILPSPLRFYGLSNMLRLWRLRRVSALFSRLEKDRNFNYFWVRCAKLICVTFFTVHCAACFYYLIAASYHDPKRTWVGITMDNFLEQSLSTQYITSVYWSITTLTTVGYGDLHPVNSMEMLFDIFFMLFILGLTSYLIGNMTNLVVHCTSRTRKFRDTIHAVSSFVQRNKLPVRLQEQIIQHLCLKFRTDVEGLQQQEILNSLPKAIRSSISHHLFYNLLDNVYLFREVSKDLIFQLVSEMNAEYFPPSEDVILQNEAPTDFYLLVSGVVVIGSAKTGDLCGEIGVLCCKPQLFTVRTKRLSQLLRFNRTTFMNIVEANVGDGTIILSNLIQHLKELKHPLVETILVEMEKMLARGRMDLPLSLCFAALREDDFLLNQLLKRGLDPNESDKDGRTALHIAASKGNDKCVMLLLNFEADPNIEDSYGNVPLWEAMLGGHESVINLLIDNGAHLQYGDAGQFSCTATEQNNLELLRDIVRYGGDVTLSISNGSTALHVAVSEGNTQIVKFLLNHGADIDKANIHGWTPRDLADQQGQEHIKTIFESFGEPKVQSVISMQGRIEPTMPLCKEGSFLGTDGSSNESCPRKSNNIFQNSIFRVMSAAHKGEKDSLFPVNIKNTRSMKDGDCTVRVTISFPEKGHGVKLVLLPRTFKELLAIGANKFGAFPTKIVNKDGAEIDNIEVIRDGDHLIFVSATPESICLNGY 848
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g01037 848 ProSiteProfiles Ankyrin repeat profile. 634 666 IPR002110 GO:0005515
Bva06g01037 848 Pfam Ion transport protein 53 297 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Bva06g01037 848 Gene3D - 505 688 IPR036770 -
Bva06g01037 848 ProSiteProfiles Ankyrin repeat region circular profile. 570 601 - -
Bva06g01037 848 ProSiteProfiles Ankyrin repeat region circular profile. 634 665 - -
Bva06g01037 848 Gene3D Jelly Rolls 358 483 IPR014710 -
Bva06g01037 848 ProSiteProfiles cAMP/cGMP binding motif profile. 370 461 IPR000595 -
Bva06g01037 848 Pfam Cyclic nucleotide-binding domain 390 463 IPR000595 -
Bva06g01037 848 Pfam Ankyrin repeats (3 copies) 609 689 IPR002110 GO:0005515
Bva06g01037 848 Pfam Ankyrin repeats (3 copies) 509 598 IPR002110 GO:0005515
Bva06g01037 848 CDD CAP_ED 370 464 IPR000595 -
Bva06g01037 848 SMART ANK_2a 504 533 IPR002110 GO:0005515
Bva06g01037 848 SMART ANK_2a 537 566 IPR002110 GO:0005515
Bva06g01037 848 SMART ANK_2a 570 599 IPR002110 GO:0005515
Bva06g01037 848 SMART ANK_2a 634 663 IPR002110 GO:0005515
Bva06g01037 848 ProSiteProfiles Ankyrin repeat region circular profile. 537 568 - -
Bva06g01037 848 PANTHER K+ TRANSPORTER 1-RELATED 7 839 - -
Bva06g01037 848 SUPERFAMILY cAMP-binding domain-like 295 479 IPR018490 -
Bva06g01037 848 Gene3D - 54 291 - -
Bva06g01037 848 PRINTS Ankyrin repeat signature 650 664 IPR002110 GO:0005515
Bva06g01037 848 PRINTS Ankyrin repeat signature 538 553 IPR002110 GO:0005515
Bva06g01037 848 ProSiteProfiles Ankyrin repeat profile. 570 602 IPR002110 GO:0005515
Bva06g01037 848 PRINTS EAG/ELK/ERG potassium channel family signature 264 275 IPR003938 GO:0005249|GO:0006813|GO:0016020
Bva06g01037 848 PRINTS EAG/ELK/ERG potassium channel family signature 282 291 IPR003938 GO:0005249|GO:0006813|GO:0016020
Bva06g01037 848 PRINTS EAG/ELK/ERG potassium channel family signature 65 72 IPR003938 GO:0005249|GO:0006813|GO:0016020
Bva06g01037 848 PRINTS EAG/ELK/ERG potassium channel family signature 99 108 IPR003938 GO:0005249|GO:0006813|GO:0016020
Bva06g01037 848 PRINTS EAG/ELK/ERG potassium channel family signature 88 98 IPR003938 GO:0005249|GO:0006813|GO:0016020
Bva06g01037 848 PRINTS EAG/ELK/ERG potassium channel family signature 238 255 IPR003938 GO:0005249|GO:0006813|GO:0016020
Bva06g01037 848 ProSiteProfiles KHA domain profile. 774 848 IPR021789 -
Bva06g01037 848 SUPERFAMILY Ankyrin repeat 508 689 IPR036770 -
Bva06g01037 848 SUPERFAMILY Voltage-gated potassium channels 47 291 - -
Bva06g01037 848 Pfam KHA, dimerisation domain of potassium ion channel 774 835 IPR021789 -
Bva06g01037 848 ProSiteProfiles Ankyrin repeat profile. 537 569 IPR002110 GO:0005515
Bva06g01037 848 Gene3D Helix hairpin bin 292 357 - -
Bva06g01037 848 PANTHER POTASSIUM CHANNEL AKT1 7 839 IPR045319 GO:0005249|GO:0006813
Bva06g01037 848 SMART cnmp_10 370 476 IPR000595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g01037 Bva-Chr6 8480016 8484101 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g01037 6 835 Ion Channels AT2G25600 58.218 0.0 994
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g01037 K21867 - qsu:112036350 1238.02