Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g01036 ATGGTGTTTACGTGCGGCCCTGGGCAAGAAGAGCTTGAACTGTCCAGGGATGGCAGCCAATATAGTCTTTCCACCGGCATATTGCCTTCACTTGGAGCCAGAAGCAACCGCAGAATCAAGCTTAGAACCTTCATTGTATCTCCTTATGACCGCCGTTACAGGATATGGGAGACTTTCCTTGTTATTCTGGTCATCTACACTGCCTGGGTGTCTCCGTTTGAATTTGGATTCCTTAAGAAACAAGCAGCGCCACTCTCCATTATTGACAACGTTGTTAATGGATTCTTTGCTGTGGATATAGTTCTTACCTTTTTCGTAGCCTACCTCGACAAAACTTCCTACTTGTTGGTTGATAACCCAAAAAAGATTGCCTGGAAATATGCAAGTTCCTGGTTGGTCTTTGATGTTGTCTCTACAATTCCTTCAGAACTTGCTCGCAAAATTTCACCTTCACCGCTCCAATCCTATGGCCTATTCAACATGCTTCGCCTTTGGCGTCTCCGAAGAGTCAGTGCACTATTTAGTAGATTGGAGAAGGACAGAAACTATAACTATTTCTGGGTTCGATGTGCCAAGCTTATCTGTGTTACACTTTTTGCTGTTCATTGTGCTGCATGTTTCTACTATCTTATTGCTGCGAGTTATCATGATCCTAAGAAAACATGGATGGGAGCAACAATGGGAAACTTCCTTGAAGAGAGCTTGTGGACTCGATACGTGACATCAATTTACTGGTCTATTACCACTTTAACAACTGTTGGTTATGGAGATTTGCATCCTGTGAATTCTAGAGAGATGATCTTTGACATCTTTTACATGCTTTTTAATCTTGGTCTAACTGCGTATTTGATTGGCAATATGACCAACTTAGTTGTCCACGGCACAAGTCGAACTAGAAAATTTAGGGATACCATACAAGCTGCCTCAAGCTTTGCACAAAGGAATCAGTTGCCTGTTCGACTACAAGAGCAGATGCTTGCACATTTGTGTTTGAAGTTCAGAACAGACTCCGAGGGACTGCAGCAACAAGAGACCCTTGATTCTCTTCCTAAAGCTATTAAATCAAGTATCTCACATCATCTTTTTTACGATCTTCTGGATAAGGTCTACTTGTTTCGTGGGGTTTCAAATGACTTGCTTTTTCAATTGGTGTCAGAGATGAAAGCTGAGTACTTTCCTCCAAAGGAGGATGTTATCTTGCAGAATGAAGCCCCTATGGATTTTTATATACTAGTCACTGGTGCTGCGGACCTAATAGTTCTCAAAAATGGAGTTGAGCAGGTTATAGGAGAAGCTAAAACTGGTGACCTGTGCGGTGAATTTGGAGTACTTTGTTATAGGCCACAACTCTTTACGGTGCGAACTAAGAGGTTAAGTCAACTATTGAGGCTAAACCGTACTACATTCTTGAACATTGTTCAAGCCAACGTAGGAGATGGCGCCATAATTATGAACAATCTCCTTCAGCATTTGAAAGAACTCAAGGATCCAATCATGGAGAAAGTTTTGGTGGAGACAGAGGACATGTTAGCTCGTGGCAGAATGGACCTACCACTGAGTCTATGCTTTGCAGCAGTTAGGGGAGATGACTTATTGTTGAATAAACTGTTGAAACGTGGTTTGTGTCCAAATGAATCAGACAATAATGGAAGGACTGCTTTGCATATTGTAGCATCTAAAGGAAGCGAGAACTGTGTCATGCTTCTGTTAGATTTTGGTGCAGATCCCAACATAAGAGATTGTGATGGGAACGTTCCCCTGTGGGATGCTATACTGGGTGGTCATGAATCAGCGATAAGCCACTTAATAGACGGTGGTGCCAAATTGAATTATGGAGATGTGAGCAAATATGCATGCACTGCCGCCGAACAGAGCAATCTCAATCTGCTCAAGGATATTGTTCACTACGGCGGAGACGTCACACTTGCTGGGAGCGATGGCAAAACTGCTCTTCATGTAGCAGTCAATGAAGGCAATGCTGAGATAGTGACGTTCCTTTTGGGTCAAGGGGCAGACATGGACAAACCAGAAATCCAAGGTTGGACCCCCAGAGAGCTAGCAGACCAACAAGGACACGAGGAAATAAAAGCCATTTTTGAGTCCTTCGGAGAGCCCAAGGTTCAACCTGTTACTACAACATCGGAAAAACAGAGTAGGACAAAGTATCTTGGGAGGTTTACCAGCGAGCCAACAATGCCTTTGCCCCAGGAAGGCTCATTTCTGGCATCTGATGGATCATTTAATCAAAGCCGTACAAGAAGAAGGAGTAATAATTATCATAACTCACTGTTTGGGATGATGTCAGCGGCACACagagggaaagaagaaagggacGTTCTGTTCCCCGTTAaccataataataacaattcaaGAAATGATATCAACATTAATGGAGCTTGTGCTTGTGCTTGTGCAGCAGCTAGAGTAACCATTAGTTGCCCTGAAAAGGGTGAACTTGGTAGGAAGCTTGTGCTGCTGCCAGGAACCTTGAAGGAGTTATTGGAGATGGGAGCTAAGAAATTTGGTGCCTTTCCCACCAAGGTTTTGACCCAAGATGGAGCTGAAATTGATGACCTAGAGGCGATCAGAGACGGtgatcatcttcttcttgtcAGTGTCAGTGCTATACCAGAATCCAATTTTCAAggttcaaaaaatttcaatccTCCATTTCTGTA 2678 0.4212 MVFTCGPGQEELELSRDGSQYSLSTGILPSLGARSNRRIKLRTFIVSPYDRRYRIWETFLVILVIYTAWVSPFEFGFLKKQAAPLSIIDNVVNGFFAVDIVLTFFVAYLDKTSYLLVDNPKKIAWKYASSWLVFDVVSTIPSELARKISPSPLQSYGLFNMLRLWRLRRVSALFSRLEKDRNYNYFWVRCAKLICVTLFAVHCAACFYYLIAASYHDPKKTWMGATMGNFLEESLWTRYVTSIYWSITTLTTVGYGDLHPVNSREMIFDIFYMLFNLGLTAYLIGNMTNLVVHGTSRTRKFRDTIQAASSFAQRNQLPVRLQEQMLAHLCLKFRTDSEGLQQQETLDSLPKAIKSSISHHLFYDLLDKVYLFRGVSNDLLFQLVSEMKAEYFPPKEDVILQNEAPMDFYILVTGAADLIVLKNGVEQVIGEAKTGDLCGEFGVLCYRPQLFTVRTKRLSQLLRLNRTTFLNIVQANVGDGAIIMNNLLQHLKELKDPIMEKVLVETEDMLARGRMDLPLSLCFAAVRGDDLLLNKLLKRGLCPNESDNNGRTALHIVASKGSENCVMLLLDFGADPNIRDCDGNVPLWDAILGGHESAISHLIDGGAKLNYGDVSKYACTAAEQSNLNLLKDIVHYGGDVTLAGSDGKTALHVAVNEGNAEIVTFLLGQGADMDKPEIQGWTPRELADQQGHEEIKAIFESFGEPKVQPVTTTSEKQSRTKYLGRFTSEPTMPLPQEGSFLASDGSFNQSRTRRRSNNYHNSLFGMMSAAHRGKEERDVLFPVNHNNNNSRNDININGACACACAAARVTISCPEKGELGRKLVLLPGTLKELLEMGAKKFGAFPTKVLTQDGAEIDDLEAIRDGDHLLLVSVSAIPESNFQGSKNFNPPFL 892
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g01036 892 PANTHER POTASSIUM CHANNEL AKT1 5 874 IPR045319 GO:0005249|GO:0006813
Bva06g01036 892 MobiDBLite consensus disorder prediction 726 756 - -
Bva06g01036 892 ProSiteProfiles Ankyrin repeat profile. 582 614 IPR002110 GO:0005515
Bva06g01036 892 SUPERFAMILY Ankyrin repeat 520 703 IPR036770 -
Bva06g01036 892 ProSiteProfiles Ankyrin repeat region circular profile. 549 580 - -
Bva06g01036 892 ProSiteProfiles Ankyrin repeat region circular profile. 646 674 - -
Bva06g01036 892 SUPERFAMILY Voltage-gated potassium channels 48 292 - -
Bva06g01036 892 ProSiteProfiles Ankyrin repeat profile. 646 678 IPR002110 GO:0005515
Bva06g01036 892 Pfam Ankyrin repeats (3 copies) 621 695 IPR002110 GO:0005515
Bva06g01036 892 Pfam Ankyrin repeats (3 copies) 522 611 IPR002110 GO:0005515
Bva06g01036 892 CDD CAP_ED 371 484 IPR000595 -
Bva06g01036 892 Gene3D Jelly Rolls 335 496 IPR014710 -
Bva06g01036 892 ProSiteProfiles Ankyrin repeat profile. 549 581 IPR002110 GO:0005515
Bva06g01036 892 ProSiteProfiles cAMP/cGMP binding motif profile. 371 473 IPR000595 -
Bva06g01036 892 Pfam KHA, dimerisation domain of potassium ion channel 808 870 IPR021789 -
Bva06g01036 892 Pfam Cyclic nucleotide-binding domain 391 475 IPR000595 -
Bva06g01036 892 PRINTS EAG/ELK/ERG potassium channel family signature 239 256 IPR003938 GO:0005249|GO:0006813|GO:0016020
Bva06g01036 892 PRINTS EAG/ELK/ERG potassium channel family signature 100 109 IPR003938 GO:0005249|GO:0006813|GO:0016020
Bva06g01036 892 PRINTS EAG/ELK/ERG potassium channel family signature 283 292 IPR003938 GO:0005249|GO:0006813|GO:0016020
Bva06g01036 892 PRINTS EAG/ELK/ERG potassium channel family signature 89 99 IPR003938 GO:0005249|GO:0006813|GO:0016020
Bva06g01036 892 PRINTS EAG/ELK/ERG potassium channel family signature 66 73 IPR003938 GO:0005249|GO:0006813|GO:0016020
Bva06g01036 892 PRINTS EAG/ELK/ERG potassium channel family signature 265 276 IPR003938 GO:0005249|GO:0006813|GO:0016020
Bva06g01036 892 PANTHER K+ TRANSPORTER 1-RELATED 5 874 - -
Bva06g01036 892 SMART ANK_2a 549 578 IPR002110 GO:0005515
Bva06g01036 892 SMART ANK_2a 646 675 IPR002110 GO:0005515
Bva06g01036 892 SMART ANK_2a 516 545 IPR002110 GO:0005515
Bva06g01036 892 SMART ANK_2a 582 611 IPR002110 GO:0005515
Bva06g01036 892 Pfam Ion transport protein 54 298 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Bva06g01036 892 Gene3D - 55 292 - -
Bva06g01036 892 SUPERFAMILY cAMP-binding domain-like 296 491 IPR018490 -
Bva06g01036 892 Gene3D - 517 700 IPR036770 -
Bva06g01036 892 MobiDBLite consensus disorder prediction 741 756 - -
Bva06g01036 892 ProSiteProfiles KHA domain profile. 808 888 IPR021789 -
Bva06g01036 892 SMART cnmp_10 371 488 IPR000595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g01036 Bva-Chr6 8473603 8478740 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g01036 13 870 Ion Channels AT2G25600 64.005 0.0 1115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g01036 K21867 - qsu:112036350 1389.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g01036 06 8473603 8478740 Bva06g01036 06 8473603 8478740 ECH