Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g01029 ATGGAGGACAGGGTAGTGAACTCCATCGCTGTTGTATCAGTGATTGCACTGATCATCGTCATCGTTGTTGCTCGTGTCTCGTTGAAACAGTCAAAGGGTTTCTTCCTCATTTGTGGCGCAGATGTTGCTGTGATTCTcgccattttttcttttatactcaTCAGACTACGTTACAATCGGAGGAGAAGGGTGGTGGAGTCTCAGCTGAGATCAGAAGGCAGAGAGCTTCGAATAGAGTACAGtttcttaagaaaaattgCAGGGGTTCCCATCAAGTTCCGGTTGAAGGAGCTAGAAGAAGCAACAGATGGGTTTCAAGCATTGCTAGGCAAAGGAGCATCTGCATCAGTTTTCAAAGGAATTCTCAGCGATGGCACTTCTGTTGCAGTGAAACGAATTAGCGGGGAAGAGCGAGGAGAGAAAGAGTTCAAGTCAGAAGTTGCAGCAATTGCCAGTGTTCAACACGTAAATCTCGTGCGGCTAATTGGCTATTGTAATGCTTCTGCAGGGCCAAGGTTCCTTGTTTATGAATATATCCCAAATGGGTCTTTGGATTGTTGGATCTTTCCCACAGAGGACTCTAATTCTCAGAGATCTCGCTGTCGTGGAGGATGCTTGTCGTGGGACTTAAGGTACAGAGTAGCCATTGATGTGGCCAGAGGACTTTCTTATCTACACCACGATTGCAGATCAAGGATCTTACATCTTGATGTGAAGCCAGAAaacatacttctggatgagaatTATAAAGCAATTGTCTCAGATTTTGGTCTCTCAAAGCTTGTGGGGAAAGACGAGAGCAGAGTTCTGACCACAGTGAGAGGAACCAGAGGGTATTTAGCCCCCGAATGGCTCTTGGAGCAAGGGGTCTCCGAGAAAACTGATGTATACAGTTATGGAATGGTTCTGTTGGAGATGATTGGAGGGCGCAGAAACGTGTGCTTGGTGGAAGATCCAAAGGACAAGTCGAAAAGGAAATGGCAATACTTTCCAAAGATTGTGAACGAGAAAGTGAAAGAAGGGAAATTCATGGAAATCGTGGATCGCAGGCTTGTGGAAGATGGTGGTGTGGACGAGAGAAAGGTGAAGAGATTGCTGTACATAGCTCTGTGGTGTATACAAGAGAGGCCTCGTCTCAGGCCTAGCCTGGCCTTGGTGGTTGAAATGCTGGAAGGGCGTGTAGTTGTGGATGAACCTCCAGATACAAGAATGATTCTGGTTGATTTGTTATCAGTAGACGAGGATTGTCATCATGTGCCAAGGTTAGCTTCTTTCACCACCCAGTCCCAGGGATCAAACATCAATTTGGATTATTCATCTGCCTACTCAATGGGAACAGTTTTATCGGGacgata 1355 0.4421 MEDRVVNSIAVVSVIALIIVIVVARVSLKQSKGFFLICGADVAVILAIFSFILIRLRYNRRRRVVESQLRSEGRELRIEYSFLRKIAGVPIKFRLKELEEATDGFQALLGKGASASVFKGILSDGTSVAVKRISGEERGEKEFKSEVAAIASVQHVNLVRLIGYCNASAGPRFLVYEYIPNGSLDCWIFPTEDSNSQRSRCRGGCLSWDLRYRVAIDVARGLSYLHHDCRSRILHLDVKPENILLDENYKAIVSDFGLSKLVGKDESRVLTTVRGTRGYLAPEWLLEQGVSEKTDVYSYGMVLLEMIGGRRNVCLVEDPKDKSKRKWQYFPKIVNEKVKEGKFMEIVDRRLVEDGGVDERKVKRLLYIALWCIQERPRLRPSLALVVEMLEGRVVVDEPPDTRMILVDLLSVDEDCHHVPRLASFTTQSQGSNINLDYSSAYSMGTVLSGR 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g01029 451 Pfam Protein kinase domain 108 386 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva06g01029 451 PANTHER RECEPTOR-LIKE KINASE 1 451 - -
Bva06g01029 451 Gene3D Transferase(Phosphotransferase) domain 1 179 399 - -
Bva06g01029 451 SUPERFAMILY Protein kinase-like (PK-like) 86 391 IPR011009 -
Bva06g01029 451 ProSitePatterns Serine/Threonine protein kinases active-site signature. 233 245 IPR008271 GO:0004672|GO:0006468
Bva06g01029 451 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 1 451 - -
Bva06g01029 451 SMART serkin_6 103 390 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva06g01029 451 Gene3D Phosphorylase Kinase; domain 1 67 178 - -
Bva06g01029 451 ProSiteProfiles Protein kinase domain profile. 103 396 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva06g01029 451 ProSitePatterns Protein kinases ATP-binding region signature. 109 131 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g01029 Bva-Chr6 8425897 8427593 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g01029 1 402 Receptor kinase-like Gene Family AT5G20050 64.356 0.0 521
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Bva06g01029 Pkinase 1.8e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g01029 - - gmx:100779485 650.203
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g01029 06 8425897 8427593 Bva06g01029 06 8425897 8427593 ECH