Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g01021 ATGGCCACCACCACCACACCCAGAGATGAATCCGACTACGATAGCAGCTGCTCCTCCTCGATAACCGTGCCGGACTCAAGCCGGAGCTGGATGAGCAACCTGAGCTTCAGCAGCCGCCGCCGCAGCTCTGTCTCTGTTTGTTCCTCCACTGACACCTCTTTCTTCCTCAGCTTCCAAGCCAAGCCACACAAGGCCAACCAAGCTGCATGGGAAGCCATGAAACGGCTCCGCAGCGACAAGGGCCGAGTCGGGCTCGACCACTTTCGGATCGTGCGCCGGCTCGGCAGCGGTGACATCGGGAATGTGTACCTCTGCCAGATAAGAAACCCAGTTGTGGGGTTGCCACAGTGCTTCTACGCCATGAAAGTGGTGGACAGAGAAGCACTTGCTATAAGGAAGAAGCTGCAAAGAGCtgaaatggaaaaagagaTCCTGGGTATGCTTGATCACCCATTTTTGCCTACTTTATACGCTGAGTTTGATGCTTCCCATTATTCTTGCTTGGTCATGGAGTTCTGCCCCGGTGGAGACTTGTATGCAGCAAGGCAGCGCCAGCCAGGGAAGCGATTTAGCATATCATCTGCTAAATTTTATGCAGCTGAGACACTCATGGCCTTGGAATATCTCCACATGATGGGCATTGTTTACAGGGATTTGAAGCCAGAGAATGTACTGGTGAGAGAGGATGGTCACATCATGCTTTCggattttgatctttctctcAAATGCGACGTCGTTCCCAAGCTTTTAAGAAGCAAAACCAGAGTGGAACGCACTTTGAAGACTAGCAAGAGTTCAACACCTTCCTGTGCTACACCCATGCAGCCTGTGCTCTCCTGTTTCTTATCAGCAtccaacaagagaaagaaagcaactGTGACGACCATTATAAGAGAAAACGTGGAAgcccaagaagaagaaatagaactAGACCCATCAGAGCTAGTAGCAGAGCCTATAAATGCTAGGTCCAAGTCATTTGTGGGAACCCATGAGTACTTGGCACCAGAGGTAATCTCAGGGCAAGGCCATGGGAGTGCAGTGGATTGGTGGACCTTTGGGGTATTCTTGTATGAAATGTTATATGGGAGAACACCCTTCAAAGgtgaaaataatgagaaaacCCTCATTAACATTCTCAAACAGCCATTAGCTTTTCCAAGAATTGCAGTTAGCAGCAGCAAGGAGTATGAAGAGATGGTCAAAGTTCAGGACCTCATAAGCAAGCTCTTAGTGAAAAATCCCAAGAAGAGAATTGGAAGCTGCATGGGTTCTGTTGAGATCAAGAGGCACGAGTTCTTCAAGGGCGTAAACTGGGCTTTGATTAGATCAGTTAGGCCACCTGAAGTCCCTTCTGATATGAACAAGATTAGGAATAGACTTCTGTTACCAAAGCTAAGCAAGAAAGAACGGGATGAACCATATCagattaatcataattttgattatttcta 1454 0.4477 MATTTTPRDESDYDSSCSSSITVPDSSRSWMSNLSFSSRRRSSVSVCSSTDTSFFLSFQAKPHKANQAAWEAMKRLRSDKGRVGLDHFRIVRRLGSGDIGNVYLCQIRNPVVGLPQCFYAMKVVDREALAIRKKLQRAEMEKEILGMLDHPFLPTLYAEFDASHYSCLVMEFCPGGDLYAARQRQPGKRFSISSAKFYAAETLMALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSLKCDVVPKLLRSKTRVERTLKTSKSSTPSCATPMQPVLSCFLSASNKRKKATVTTIIRENVEAQEEEIELDPSELVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTFGVFLYEMLYGRTPFKGENNEKTLINILKQPLAFPRIAVSSSKEYEEMVKVQDLISKLLVKNPKKRIGSCMGSVEIKRHEFFKGVNWALIRSVRPPEVPSDMNKIRNRLLLPKLSKKERDEPYQINHNFDYF 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g01021 484 Gene3D Phosphorylase Kinase; domain 1 85 176 - -
Bva06g01021 484 SMART serkin_6 88 434 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva06g01021 484 PANTHER FLIPPASE KINASE 1-RELATED 5 484 - -
Bva06g01021 484 ProSitePatterns Serine/Threonine protein kinases active-site signature. 214 226 IPR008271 GO:0004672|GO:0006468
Bva06g01021 484 Coils Coil 121 141 - -
Bva06g01021 484 Pfam Protein kinase domain 324 434 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva06g01021 484 Pfam Protein kinase domain 89 243 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva06g01021 484 ProSiteProfiles Protein kinase domain profile. 88 434 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva06g01021 484 CDD STKc_phototropin_like 86 451 - -
Bva06g01021 484 SUPERFAMILY Protein kinase-like (PK-like) 73 452 IPR011009 -
Bva06g01021 484 Gene3D Transferase(Phosphotransferase) domain 1 177 244 - -
Bva06g01021 484 PANTHER PROTEIN KINASE PINOID 2 5 484 - -
Bva06g01021 484 Gene3D Transferase(Phosphotransferase) domain 1 322 452 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g01021 Bva-Chr6 8402600 8404329 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g01021 9 484 AGC Kinase Gene Family AT2G26700 61.524 0.0 614
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Bva06g01021 Pkinase 1.4e-31 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g01021 K08286 - gmx:100777988 789.645
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g01021 06 8402600 8404329 Bva06g01021 06 8402600 8404329 ECH