Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g00978 ATGAAGAAGGTAAAGAGAAAAGTTGGCAAGTATGACGTGGGTAGAACCATTGGTGAAGGTACATTTGCCAAGGTTAAATTTGCAAAAAACACAGAAACAGGGGAGCGTGTGGCTATGAAAATGATGACTAAGAGTACCATTCTTAAGCATAAAATGGTTGAACAGattaaaagagaaatatccATTATGAAGATTGTCGGACACCCTAATATAGTAAAGTTGCACGAGGTTTTGGCCAGCGAGAgcaaaatttacataattctTGAGCTTGTGACGGGAGGAGAGTTATACgataaaattGTTCAGCAGGGAAAGCTTTCTGTAAATGAGGCTAGGCGTTACTTTCAACAACTTATAGATGCTGTTGCTCATTGTCACAGTAAGGGTGTGTACCATAGAGACTTGAAGCCTGAAAATCTTCTTCTTGATGCTTACGGAAATTTGAAAGTTTCTGACTTTGGGCTGAGTGCACTGACTCAGCAGGGTGATGGCCTTCTTCACACCACATGTGGGACCCCAAATTATGTTGCTCCGGAGGTATCAGCTAGCTATGGACAACTCACTTATGATGAGAGAACTCTTTTGCCTTTTTATTTGCTGAATCACAAAGACGTGAATAGCGGCTCAGTTCGCTGTTCAGAATTTGTTGTGTTAAATGATGATTTTTGTGCTTTCTGGTGCAATGACATTGATATACTTTGTGAATTCTTGCATGTTTCTTCTAAAGTGCTCAGCAATCTTGGATATGATGGTGCAGCAGCTGATGTTTGGTCATGTGGAGTAATCCTTTATGTTTTAATGGCTGGATATCTTCCATTTGAGGAAGCAGACCTTCCGTCCTTGTACAAAAGGATCAAAACTTCAGAATTTACTTGCCCATTCTGGTTTCCTGCAGAGGCGAAGACATTGATACACAAAATACTAGATCCAAATCCTAAAACACGTCTTCGAATTAAAGAAGTAAGAAAAGATTCATGGTTCAGGAAAAACAATGTTCCTGTCAAACTtagggaaaatgaaaaagtgaatTTGGATGATGTTCGAGCTGTTTTTGATGATATTCAGGACAAACGTGTAGCTGAACAGTCAGAAAATACTGATGGAAGGCCTTTGATAATGAATGCATTTGAGATGATTACCCTATCACAAGGGTTAAATCTATCAGCACTATTTGACAGGCGTCAGGATTATGTAAAGCGGCAAACTCGTTTTGTTTCGCGTAAACCGGCAAGTGTTATAATTTCATCTATTGAAGCAGTTGCTGAGTCGATGGGTCTTAAGGTCCATTCTCGCAATTACAAGATGAGGCTTGAAGGAGTATCTATGAATAAGGCTGGACAATTTGCCGTAGTATTGGAGGTCTTTGAAGTTGCACCATCACTTTTCATGGTGGATGTACGAAAGGCTGCTGGGGATACACTTGAATATCACAAGTTTTACAATAACTTTTGTGACAAACTAGATAGTATTATATGGCGACCAGCAGGGGCTACGCCAAATTCTAGTTTGTTTAGACAAATGACTTGCTG 1529 0.3859 MKKVKRKVGKYDVGRTIGEGTFAKVKFAKNTETGERVAMKMMTKSTILKHKMVEQIKREISIMKIVGHPNIVKLHEVLASESKIYIILELVTGGELYDKIVQQGKLSVNEARRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDAYGNLKVSDFGLSALTQQGDGLLHTTCGTPNYVAPEVLSNLGYDGAAADVWSCGVILYVLMAGYLPFEEADLPSLYKRIKTSEFTCPFWFPAEAKTLIHKILDPNPKTRLRIKEVRKDSWFRKNNVPVKLRENEKVNLDDVRAVFDDIQDKRVAEQSENTDGRPLIMNAFEMITLSQGLNLSALFDRRQDYVKRQTRFVSRKPASVIISSIEAVAESMGLKVHSRNYKMRLEGVSMNKAGQFAVVLEVFEVAPSLFMVDVRKAAGDTLEYHKFYNNFCDKLDSIIWRPAGATPNSSLFRQMTC 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g00978 446 ProSiteProfiles NAF domain profile. 305 329 IPR018451 GO:0007165
Bva06g00978 446 CDD CIPK_C 311 424 - -
Bva06g00978 446 Pfam Protein kinase domain 11 264 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva06g00978 446 Gene3D Kinase associated domain 1, KA1 304 430 - -
Bva06g00978 446 ProSitePatterns Serine/Threonine protein kinases active-site signature. 130 142 IPR008271 GO:0004672|GO:0006468
Bva06g00978 446 Pfam NAF domain 307 366 IPR004041 GO:0007165
Bva06g00978 446 SMART serkin_6 11 264 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva06g00978 446 Gene3D Transferase(Phosphotransferase) domain 1 91 292 - -
Bva06g00978 446 Gene3D Phosphorylase Kinase; domain 1 1 90 - -
Bva06g00978 446 ProSiteProfiles Protein kinase domain profile. 11 264 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva06g00978 446 SUPERFAMILY Protein kinase-like (PK-like) 8 315 IPR011009 -
Bva06g00978 446 ProSitePatterns Protein kinases ATP-binding region signature. 17 49 IPR017441 GO:0005524
Bva06g00978 446 PANTHER - 4 440 - -
Bva06g00978 446 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 4 440 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g00978 Bva-Chr6 8184883 8192077 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g00978 1 372 CBL-interacting serine-threonine protein kinases AT5G35410 72.849 0.0 580
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Bva06g00978 Pkinase 5.7e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g00978 - - gmx:100811380 744.191
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g00978 06 8184883 8192077 Bva06g00978 06 8184883 8192077 ECH