Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g00973 ATGTCGAGCTGCAGCATCGATGTTGCGCCTGAGCAACTCTGCTACATCCCCTGCAACTTTTGCAACATTGTTCTTGCGGTGAGTGTTCCATGCAGCAACCTCTTCGACATAGTGACCGTTCGATGTGGGCACTGCACCAATCTGTGGTCCGTGAATATGGCTGCAGCATTCCAGTCTCTGTCGTGGCAAGATCTCCAGGGACCCTGCTACACCAATCCAGAGTATAGAAATGACGCAGGCTCCTCTTCCAAATGCAATAACAGGATTGCAATGGGAGCACCCACCACACATGTAACTGAGGAAAGGGTTGTGAACCGTCcTCCCGAGAAGAGGCAGCGCGTACCTTCTGCATATAATCAGTTCATAAAGGAAGAGATTCAGAGGATCAAGGCCAATAATCCAGATATCAGTCACAGGGAAGCATTCAGTACTGCTGCAAAGAATtgggCACACTTCCCTCACATTCATTTTGGGTTGATGTTGGAGACCAACAATCAAGCTAAGCTGGACAACGGTTCTGAGAAGCACTTAATGTCAAGGGCTGCAGTGTTCAACAAATG 560 0.4804 MSSCSIDVAPEQLCYIPCNFCNIVLAVSVPCSNLFDIVTVRCGHCTNLWSVNMAAAFQSLSWQDLQGPCYTNPEYRNDAGSSSKCNNRIAMGAPTTHVTEERVVNRPPEKRQRVPSAYNQFIKEEIQRIKANNPDISHREAFSTAAKNWAHFPHIHFGLMLETNNQAKLDNGSEKHLMSRAAVFNK 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g00973 186 PANTHER PROTEIN YABBY 6-RELATED 1 176 IPR006780 GO:0007275
Bva06g00973 186 Gene3D High mobility group box domain 98 154 IPR036910 -
Bva06g00973 186 Pfam YABBY protein 9 159 IPR006780 GO:0007275
Bva06g00973 186 PANTHER AXIAL REGULATOR YABBY 5 1 176 - -
Bva06g00973 186 SUPERFAMILY HMG-box 103 152 IPR036910 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g00973 Bva-Chr6 8159857 8163633 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g00973 8 169 C2C2-YABBY Transcription Factor Family AT2G26580 77.160 6.67e-91 261
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-YABBY Bva06g00973 YABBY 5.7e-69 CL0114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g00973 K25796 - gmx:100499942 359.377