Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g00957 ATGGAAAGTAAGGAACTAGTGAAGCTACAACCCAAGAAAAATCTATGGAAGCCTGAAGAAGACTTGGTTCTGAAAGCTTACATTGAAACTCATGGTGAAGGCAAATGGGCCACCGTGTCCAAAAATTCAGGGCTTAAGAGAGGAGGGAAGAGTTGCAGGCTAAGATGGAAAAACTACTTGAGACCTGATATTAAACGTGGAGATATGTCTCAAGAGGAAGAAGACCTTATTATCAGGCTGCATAAGCTTCTAGGCAACCGATGGTCACTGATCGCTGGGCGGCTTCCTGGTAGAACTGATAATGAAGTGAAAAATCACTGGAATACCCATTTGAACAAGAGAAGCCATCGAGGCAAAAAGAGAATCATTGATTCGAACAATGATAAagaaagcaacaagaaaatccGGGCATGCAATAATTCCGAGGAAACTTGCCGTCTAAGTTCAACAAGCATTGCTGAAACAGGGTTAGATGTAAtggaaaaggagaaggaagagaaagaagagagcaGCAGCATGACAAACTCTTGGATGGACGAAACGCAGAGCTTTGACTGTGACCTAGATTGTCCAATTCTGCCGGCAAATAGTGCAGTGTTGGGTTTTGAAGACGAGACTTTCAACTTGGAGCCTTTTATCTCCCTTGAAGCATTAGGTTGTGGAACGATGGATTGCGATTCTCATCTGCGGTGGATCATGccgta 704 0.4006 MESKELVKLQPKKNLWKPEEDLVLKAYIETHGEGKWATVSKNSGLKRGGKSCRLRWKNYLRPDIKRGDMSQEEEDLIIRLHKLLGNRWSLIAGRLPGRTDNEVKNHWNTHLNKRSHRGKKRIIDSNNDKESNKKIRACNNSEETCRLSSTSIAETGLDVMEKEKEEKEESSSMTNSWMDETQSFDCDLDCPILPANSAVLGFEDETFNLEPFISLEALGCGTMDCDSHLRWIMP 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g00957 234 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 12 60 IPR017930 -
Bva06g00957 234 Gene3D - 68 142 - -
Bva06g00957 234 ProSiteProfiles Myb-like domain profile. 61 111 IPR001005 -
Bva06g00957 234 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 2 208 - -
Bva06g00957 234 ProSiteProfiles Myb-like domain profile. 8 60 IPR001005 -
Bva06g00957 234 SMART sant 12 62 IPR001005 -
Bva06g00957 234 SMART sant 65 113 IPR001005 -
Bva06g00957 234 Gene3D - 13 65 - -
Bva06g00957 234 CDD SANT 69 111 IPR001005 -
Bva06g00957 234 CDD SANT 16 60 IPR001005 -
Bva06g00957 234 PANTHER TUBER-SPECIFIC AND SUCROSE-RESPONSIVE ELEMENT BINDING FACTOR 2 208 - -
Bva06g00957 234 SUPERFAMILY Homeodomain-like 12 107 IPR009057 -
Bva06g00957 234 Pfam Myb-like DNA-binding domain 66 111 IPR001005 -
Bva06g00957 234 Pfam Myb-like DNA-binding domain 14 60 IPR001005 -
Bva06g00957 234 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 61 115 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g00957 Bva-Chr6 8065400 8066364 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g00957 12 215 MYB Transcription Factor Family AT5G52600 49.289 5.77e-65 198
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bva06g00957 Myb_DNA-binding 2e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g00957 K09422 - rcu:8270197 261.922
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g00957 06 8065400 8066364 Bva06g00957 06 8065400 8066364 ECH