Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g00954 ATGGAGAAGAAGTGCGGGTGCTGGTCTGTTCTCAAACGCGGCGTTAGAGGTGCGTGCAAACCCTCTGCTTCCAGAGACTTTGCTAACACTATCCCTCGTTCTAGTCTCGTTTATGATGCAGCAACTGAGACACGATACTTGAATGCTAGCAATCGAGAACTATGTGCTCCCAATGAAGCTCAATTTTCTTGTGATAATACTGATCCCCCACCTCAGGAAAACAAGGCTTCTTGGCAGCtccttgaattttcttttcaggaaCTAAAAGCTGCTACTGGGAATTTCAGACCTGATAGCATTCTTGGGGAGGGTGGGTTTGGCTATGTTTTCAAAGGGTGGATTGAGGAAAATGGGACAGCCCCAGCAAAACCTGGGTCAGGAATTACAGTGGCTGTCAAAAGCTTGAAGCCTGATGGTCTTCAGGGCCATAGAGAATGGGTGGCTGAAGTTGACTTTCTTGGACAGCTTCATCATCCTAACCTTGTCAAACTTATCGGTTACTGCATCGAAGATGATCAGCGGCTTCTTGTATACGAGTTTATGACTCGTGGAAGTCTAGAGAATCATCTATTCAGAAGAACTGTACCTCTTCCATGGTCCAACAGAGTCAAGATTGCACTCGGTGCAGCAAAAGGATTGGCCTTCCTCCATAATGGTCCAGAACCAGTCATTTACAGAGATTTTAAAACATCAAACATTTTGCTTGATTCGGAATATAATGCCAAGCTCTCAGATTTTGGTCTAGCAAAAGCAGGGCCTCAAGGAGACAAGACACATGTTTCCACAAGAGTTGTTGGCACTTATGGTTATGCTGCTCCAGAATATGTCATGACAGGACACTTGACAGCTAAAAGTGATGTTTATAGCTTTGGAGTTGTgttacttgaaattttaacaGGAAGAAGATCAATGGACAAGAAACGCCCAAGTGGGGAACAAAATCTTGTTGCATGGGCAAGGCCTTACTTAGCTGACAAGCGAAAACTTTACCAACTTGTGGATCCTCGATTGGAACTAAACTATTCTATTAAAGGGGTTCAGAAGATCTCTCAGTTAGCTTATAATTGCCTCAGCAGAGATCCTAAATGTCGTCCAAACATGGATGAAGTTGTGAAGGCTCTGATTCCATTGCAGGATCTCAATGACCTCGCTATCTTATCTTACCACTCTCGTTTGTCTCAAcaagggagaagaagaaagaaatcagaAGGACCTCCACAGCTCACCTACACACAATCCAAGAACATAAGGGCTTCTCCCTTGAATGTTAATACTGGGAAGAAGCATAGGTG 1292 0.4218 MEKKCGCWSVLKRGVRGACKPSASRDFANTIPRSSLVYDAATETRYLNASNRELCAPNEAQFSCDNTDPPPQENKASWQLLEFSFQELKAATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTVPLPWSNRVKIALGAAKGLAFLHNGPEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGYAAPEYVMTGHLTAKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARPYLADKRKLYQLVDPRLELNYSIKGVQKISQLAYNCLSRDPKCRPNMDEVVKALIPLQDLNDLAILSYHSRLSQQGRRRKKSEGPPQLTYTQSKNIRASPLNVNTGKKHR 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g00954 430 ProSitePatterns Serine/Threonine protein kinases active-site signature. 223 235 IPR008271 GO:0004672|GO:0006468
Bva06g00954 430 Gene3D Transferase(Phosphotransferase) domain 1 181 389 - -
Bva06g00954 430 Pfam Protein tyrosine and serine/threonine kinase 99 374 IPR001245 GO:0004672|GO:0006468
Bva06g00954 430 ProSiteProfiles Protein kinase domain profile. 95 392 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva06g00954 430 SUPERFAMILY Protein kinase-like (PK-like) 78 375 IPR011009 -
Bva06g00954 430 PANTHER OS01G0588500 PROTEIN-RELATED 63 395 - -
Bva06g00954 430 CDD STKc_IRAK 101 377 - -
Bva06g00954 430 Gene3D Phosphorylase Kinase; domain 1 71 180 - -
Bva06g00954 430 ProSitePatterns Protein kinases ATP-binding region signature. 101 133 IPR017441 GO:0005524
Bva06g00954 430 MobiDBLite consensus disorder prediction 394 430 - -
Bva06g00954 430 PANTHER OS01G0588500 PROTEIN 63 395 - -
Bva06g00954 430 MobiDBLite consensus disorder prediction 405 422 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g00954 Bva-Chr6 8039870 8043438 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g00954 83 374 Glycoside Hydrolase AT3G07070 56.081 4.97e-111 331
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Bva06g00954 PK_Tyr_Ser-Thr 9.6e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g00954 - - aprc:113848012 806.594
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g00954 06 8039870 8043438 Bva06g00954 06 8039870 8043438 ECH