Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g00937 ATGTCTTCTGACCACTCGAATGTTGATGACGTAGAGTCCCTCATTAATCCCCTGCTCTCTTCTAACGTTCAAAGATCTGTCGTCAACTCCACTTCCCAGGTTGCTATTGTCGGCGCCAATGTCTGCCCCATCGAGAGCCTCGACTATGAGATTTTCGAGAATGAGTTCTTCAAGCAGGATTGGAGGAGCCGAAGCAGGGTTCAAATATTCCAGTACATGTTTGTCAAGTGGCTCTTGTGCTTTCTGGTTGGTTTGATTGTTAGCGTCGTCGGCTTTTTCAATAATCTGGCGGTTGAAAATGTTGCCGGCATTAAGTTCGTGATTACATCGGATATGATGTTGGAGAGGAGGTTTTATATGGCCTTTCTGGTGTTCTTTTCTTCGAATTTGGTTCTCACGCTTTTTGCTGCTATTATCACTGCTTTTATAGCACCTGCTGCTACCGGCTCTGGTATACCGGAAGTGAAAGCTTACCTTAATGGCGTAGACGCACCCGGAATATTTACGTTACGAACCCTATTTGTTAAGATTATTGGAAGCATTTCGGCAGTGTCATCATCACTTCTTATTGGAAAGGCAGGGCCAATGGTGCATACAGGTGCCTGTGTGGCATCAGTGCTGGGACAGGGTGGGTCAAAGAGATATGGTTTAACATGGAAATGGTTACGCTATTTTAAGAATGATCGAGATCGACGAGACCTAGTAACATGTGGATCAGCAGCCGGAATTGCTGCTGCCTTCCGTGCCCCTGTTGGTGGGGTCTTGTTTGCTCTTGAAGAGATGTCATCCTGGTGGAAAAGTGGCCTTCTGTGGAGGACTTTTTTTACCACCGCAACAGTTGCAATTGTGCTTCGCGCTCTGACTGATGTTTGTTTAAGTGGCAAATGTGGCCTGTTTGGTAAAGGGGGGCTGATAATGTTTGATGCTTATTCAGCAAGTGTTTCATATCATATTGAGGATGTGCCTCCTGTGCTTCTTATCGGAGTTATAGGGGGAATACTTGGAGCCTTATATAACTTCCTGTTAATCAAACTTCTCCGTGTATACAGTAGTATCAATGAGAAAGGCATTGCTTACAAAATTTTGACTGCgtgtttaatttctatttttacctCCTGTCTTCTTTTCGGATTGCCATGGCTTGCATCTTGCCAACCTTGTCCAGCTGACGCAACTGAGGCTTGTCCGACAATAGGCCGCTCTGGTAACTATAAGAAATTTCAGTGCCCTCCAGGTCACTACAATGATCTTGCCAGCCTCATTTTTAACACAAACGATGATGCTATCAAAAATCTGTTTAGCAAGGACACTGACTACGAGTTTGAGTTCAAATCGATGCTCATCTTTTTTGTCACATGCTTTTTCCTTACTATTTTTAGTTATGGGATTGTAGCTCCAGCTGGCCTTTTTGTACCAGTTATTGTGACTGGTGCATCTTATGGACGTCTTGTAGGAATGTTGGTTGGCAAACGCTCAAATCTTAACCATGGCCTTTATGCTGTTCTGGGTGCTGCTTCCCTTCTAGGTGGATCGATGAGGATGACAGTTTCCGTATGTGTAATTATTCTAGAACTGACCAATAATTTGCTATTGCTACCCATGATAATGTTAGTGCTTTTGGTATCCAAGACAGTAGCAGACACTTTCaatgcaaatatatatgacCTAATTATGAAGGCAAAGGGGTTTCCTTATTTAGTTACTTATGCTGAGCCGTATATGAGGCAGCTAACAGTAGCGGATGTGGTCACAGGCCCGCTCCAGCTCTTTAATGGCATTGAGAAGGTCCGCAACATagtttttattctcaaaactACGAAGCACAATGCTTTCCCTGTAATTGATGAACCTCCATACTCTGAAGCTTCTACTTTATTTGGTGTAATCCTTCGTGACCATCTTCTTACACTGTTAAAGGGTAAAGCTTTCTTGTCCAGACCAATGGCAATAGGTGACTATGCCTTACAGCAGTTTTCATCAGATGATTTTGCAAAAAGGGGTTCAGGCAACAATGACAAGATAGAGAATATACAGTTAACTGAGGAAGAGATGGATATGTTCATAGATTTGCATCCGTTTTGCAATGCTTCACCTTATACTGTTGTGGAGACAATGTCAATAGCCAAGGCCCTTAGGCTTTTCCGAGAAGTTGGTTTAAGGCACCTGCTAGTGATACCTAAGATCCCTGGAAGATCACCTGTAGTGGGTATACTGACAAGACACGATTTCATGCCGGAACATATACTGGGTTTGCATCCTTTTCTGGGAAGAAACAAGTGGAAAAAATTGCGATTCAAGCTCCCAAGATTCTTCAAAAGCTTTTA 2324 0.4243 MSSDHSNVDDVESLINPLLSSNVQRSVVNSTSQVAIVGANVCPIESLDYEIFENEFFKQDWRSRSRVQIFQYMFVKWLLCFLVGLIVSVVGFFNNLAVENVAGIKFVITSDMMLERRFYMAFLVFFSSNLVLTLFAAIITAFIAPAATGSGIPEVKAYLNGVDAPGIFTLRTLFVKIIGSISAVSSSLLIGKAGPMVHTGACVASVLGQGGSKRYGLTWKWLRYFKNDRDRRDLVTCGSAAGIAAAFRAPVGGVLFALEEMSSWWKSGLLWRTFFTTATVAIVLRALTDVCLSGKCGLFGKGGLIMFDAYSASVSYHIEDVPPVLLIGVIGGILGALYNFLLIKLLRVYSSINEKGIAYKILTACLISIFTSCLLFGLPWLASCQPCPADATEACPTIGRSGNYKKFQCPPGHYNDLASLIFNTNDDAIKNLFSKDTDYEFEFKSMLIFFVTCFFLTIFSYGIVAPAGLFVPVIVTGASYGRLVGMLVGKRSNLNHGLYAVLGAASLLGGSMRMTVSVCVIILELTNNLLLLPMIMLVLLVSKTVADTFNANIYDLIMKAKGFPYLVTYAEPYMRQLTVADVVTGPLQLFNGIEKVRNIVFILKTTKHNAFPVIDEPPYSEASTLFGVILRDHLLTLLKGKAFLSRPMAIGDYALQQFSSDDFAKRGSGNNDKIENIQLTEEEMDMFIDLHPFCNASPYTVVETMSIAKALRLFREVGLRHLLVIPKIPGRSPVVGILTRHDFMPEHILGLHPFLGRNKWKKLRFKLPRFFKSF 774
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g00937 774 ProSiteProfiles CBS domain profile. 690 754 IPR000644 -
Bva06g00937 774 CDD CBS_pair_voltage-gated_CLC_euk_bac 578 746 - -
Bva06g00937 774 SUPERFAMILY Clc chloride channel 54 566 IPR014743 -
Bva06g00937 774 Pfam Voltage gated chloride channel 133 547 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Bva06g00937 774 Gene3D Clc chloride channel 68 567 - -
Bva06g00937 774 Gene3D - 568 745 IPR046342 -
Bva06g00937 774 SUPERFAMILY CBS-domain pair 570 744 IPR046342 -
Bva06g00937 774 PANTHER CHLORIDE CHANNEL PROTEIN 7 765 - -
Bva06g00937 774 PRINTS Plant CLC chloride channel signature 261 269 IPR002251 GO:0005247|GO:0006821|GO:0016020
Bva06g00937 774 PRINTS Plant CLC chloride channel signature 275 285 IPR002251 GO:0005247|GO:0006821|GO:0016020
Bva06g00937 774 PRINTS Plant CLC chloride channel signature 50 58 IPR002251 GO:0005247|GO:0006821|GO:0016020
Bva06g00937 774 PRINTS Plant CLC chloride channel signature 417 433 IPR002251 GO:0005247|GO:0006821|GO:0016020
Bva06g00937 774 PRINTS Plant CLC chloride channel signature 293 300 IPR002251 GO:0005247|GO:0006821|GO:0016020
Bva06g00937 774 PRINTS Chloride channel signature 465 485 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Bva06g00937 774 PRINTS Chloride channel signature 497 513 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Bva06g00937 774 PRINTS Chloride channel signature 515 534 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Bva06g00937 774 PRINTS Chloride channel signature 176 195 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Bva06g00937 774 PRINTS Chloride channel signature 145 162 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Bva06g00937 774 PRINTS Chloride channel signature 240 259 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Bva06g00937 774 PRINTS Chloride channel signature 553 567 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Bva06g00937 774 CDD ClC_6_like 45 566 - -
Bva06g00937 774 Pfam CBS domain 694 743 IPR000644 -
Bva06g00937 774 PANTHER CHLORIDE CHANNEL PROTEIN CLC FAMILY MEMBER 7 765 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g00937 Bva-Chr6 7917316 7921117 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g00937 7 770 Ion Channels AT5G33280 76.309 0.0 1176
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g00937 K05016 - jre:108995632 1198.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g00937 06 7917316 7921117 Bva06g00937 06 7917316 7921117 ECH