Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g00913 atggggaggaaaaagaaacaagtagGAGAAAAATCAAGTAATGATAGTGGAAAACAAAGCGAAGTTGGAGATAGTAGCCCCGAAGCATATGATAGTGATACAATGGTATTTATATCCATGGCTCAAGAGTTGAAGGATGAAGGAAACAAACTGTTCCAAAAAAGAGACCTTGAAGGAGCTatgttaaaatatgagaaagcCCTGAAACTGCTTCCAAGAAATCATATAGATGTGTCCTATCTACGGAGTCACATGGCCGCCTGTTACATGCAGATGGGACTCAGTGAGTACCCAAGGGCAATCCGTGAATGTGATTTGGCTCTTGAAGTTACACCTAAATACAGTAAAGCGCTGACGAAGAGAGCAAGGTGCTACGAGGCTTTGAATAGGCTGGATTTAGCTTTGAGGGATGTTAGTGCTGTTTTGGTCATGGAGCCAAATAATGTTATGGCGTTGGAGATTTCAGAAAGAGTTAAAAGTGAACTTGAGAAGAAGGGATTAAGAGTAAATGATACAGTAATTGAATTGCCTCCAGATTATGTTGAACCTCCTTATGCTTTGCCTACAGAAAAAGTAGTGAAAGAGAAGACACGTaagaaaaagagcaaaaaaGTTGAGGTGGAAGCTGCTGATAACAACAAATTCGAAGGAGAACAAgttgaggagaagtttgaagaGAAGAAGGCTGAGGATGGTATTATGGACAAGAAGGCTGTaaacaaatccaaaaagaaaaagggcaaGGAAAAAATTGATGAGAATAAGGTTGATGTTAAGGAGGTTGTggatgaaaaaattaatggcaGAATGGAAGATACGTCTAAGAGAACAGCAAAGCTTGTTTTTGGTGAGGATATAAGATGGGCTGAATTGCCAGTTAATTGCAGCCTCCTGCAACTAAGAGAAGTTATTCTTGACAGATTCCCGAGTTTAGGAGCGGTTCTTGTCAAGTACAGGGACCCAGAAGGTGATTTGGTCACGATCACTTCTAATGAAGAACTAAGATTGGCAGAAATATCAGCAGGATCACAGGGTTCTATTCGGCTGCACATAGTAGAAGCTGATCCTGATCAGGATCCATTCTTTGAGAAACTTAATGAAAGGGAGGTGCAAAAAATTAGCACTGGTAATGCACCTGAGAATGGTTTCGAGGTGAAAGCTAAGGGAACTACTAGCTCATCTTACATTGAGGATTGGATAATCCGGTTCGCCCAACTGTTCAAGAACCATGTTGGATTTGAATCTGACAGATACTTGGATTTTCATGAACTAGGGATGAAACTCTATTCTGAAGCAATGGAGGAGACAACTACAAGTGAAGAGGCACAGGGCCTATTTGACATGGCAGGGGACAAGTTCCAAGAGATGGCAGCTCTAGCATTGTTCAACTGGGGAAATGTTCACATGTCCAGGGCAAGGAAGAAGGTGTATTTCACAGAAGATTCTTCTAAAGAGAATCTGAATGAACAAATCAAAAGTGCATATGACTGGGCacagaaagaatatataaaagccggagaaaaatatgaagcAGCCATTAAACTTAAATCAGATTTTTATGAAGGTTTTCTGGCACTAGGGCAGCAACAATTTGAGCAAGCAAAACTTTCTTGGTATTATGCAATCTGCAGTAATGCTGATTCAGCGACATTGCTTTCCACTGAGGTTCTGCAGCTTTACAACAATGCTGAGGAAAATATGGAGAAGGGAATACAAATGTGGGAAGAATCAGAGCAGCAGCGATTGAGAGAAGCCTCCAAGTCAGATGATGTCAAATTACAGTTGCAGAACATGGGATTAGAAGGCCtgtttaaaaatatgtcaTCAGATGAAATTGCTTCTCAGGTGGCTAATATGAGGTCTCAAATAAATCTCTTGTGGGGTACCATGCTATATGAGCGCTCAATTGTAGAATTCAAATTAGGGCTACCAGTGTGGCATGAAAGTCTGGAAGTTGCAATTGAGAAGTTTGATCTTGCTGGAGCTTCTCCAACAGATATAGCCGTGATGTTGAAGAATCACTGTTCAAACAATACTGCTGTGGACGGTCTAGGATTCAAAATCGACGAAATAGTACAGGCATGGAATGAGATGTATGAAGCTAAAAAGCGGTTGGAAGGAGTTCCATCATTTCGCCTGGAACCCTTATTAAGAAGGCgagtttcaaatatttatcatgCATTGGAGCTTGCTTG 2195 0.3786 MGRKKKQVGEKSSNDSGKQSEVGDSSPEAYDSDTMVFISMAQELKDEGNKLFQKRDLEGAMLKYEKALKLLPRNHIDVSYLRSHMAACYMQMGLSEYPRAIRECDLALEVTPKYSKALTKRARCYEALNRLDLALRDVSAVLVMEPNNVMALEISERVKSELEKKGLRVNDTVIELPPDYVEPPYALPTEKVVKEKTRKKKSKKVEVEAADNNKFEGEQVEEKFEEKKAEDGIMDKKAVNKSKKKKGKEKIDENKVDVKEVVDEKINGRMEDTSKRTAKLVFGEDIRWAELPVNCSLLQLREVILDRFPSLGAVLVKYRDPEGDLVTITSNEELRLAEISAGSQGSIRLHIVEADPDQDPFFEKLNEREVQKISTGNAPENGFEVKAKGTTSSSYIEDWIIRFAQLFKNHVGFESDRYLDFHELGMKLYSEAMEETTTSEEAQGLFDMAGDKFQEMAALALFNWGNVHMSRARKKVYFTEDSSKENLNEQIKSAYDWAQKEYIKAGEKYEAAIKLKSDFYEGFLALGQQQFEQAKLSWYYAICSNADSATLLSTEVLQLYNNAEENMEKGIQMWEESEQQRLREASKSDDVKLQLQNMGLEGLFKNMSSDEIASQVANMRSQINLLWGTMLYERSIVEFKLGLPVWHESLEVAIEKFDLAGASPTDIAVMLKNHCSNNTAVDGLGFKIDEIVQAWNEMYEAKKRLEGVPSFRLEPLLRRRVSNIYHALELA 731
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g00913 731 MobiDBLite consensus disorder prediction 1 30 - -
Bva06g00913 731 Pfam PB1 domain 277 353 IPR000270 GO:0005515
Bva06g00913 731 SMART tpr_5 115 148 IPR019734 GO:0005515
Bva06g00913 731 SMART tpr_5 41 74 IPR019734 GO:0005515
Bva06g00913 731 SMART tpr_5 79 114 IPR019734 GO:0005515
Bva06g00913 731 ProSiteProfiles TPR repeat profile. 41 74 IPR019734 GO:0005515
Bva06g00913 731 PANTHER PROTEIN CLMP1 3 730 IPR044517 -
Bva06g00913 731 MobiDBLite consensus disorder prediction 13 27 - -
Bva06g00913 731 SMART PB1_new 275 354 IPR000270 GO:0005515
Bva06g00913 731 Gene3D Tetratricopeptide repeat domain 38 170 IPR011990 GO:0005515
Bva06g00913 731 CDD PB1 283 351 - -
Bva06g00913 731 Coils Coil 193 213 - -
Bva06g00913 731 PANTHER PROTEIN PHOX3 3 730 - -
Bva06g00913 731 SUPERFAMILY CAD & PB1 domains 271 365 - -
Bva06g00913 731 ProSiteProfiles PB1 domain profile. 275 354 IPR000270 GO:0005515
Bva06g00913 731 SUPERFAMILY TPR-like 39 159 IPR011990 GO:0005515
Bva06g00913 731 Gene3D - 275 357 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g00913 Bva-Chr6 7824406 7828359 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g00913 24 148 Calmodulin-binding Proteins AT3G25230 32.117 4.40e-09 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g00913 - - gmx:100778972 1023.08
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g00769 05 3876640 3881068 Bva06g00913 06 7824406 7828359 BWGD
Bva06g00913 06 7824406 7828359 Bva06g00913 06 7824406 7828359 ECH