Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g00904 ATGGGATACCAGAAACCTGCATGGTTGGAAGCTCTTTATACGCAGAAGTTCTTTGTGGGCTGTTCTTACCATGAAAATGCAAAGAAGAATGAGAAGAACGTTTACTGCTTGGATTGTTGCACCAGTATTTGCCCTCACTGCTTGCCTTCTCATCGCTTCCATAGGCTTCTTCAGGTTCGTCGCTATGTTTATCATGACGTTGTCAGATTGGAAGATCTTCAGAAACTCATAGACTGCTCCAACGTTCAGGCTTACACCATCAACAGTGCAAAAGTGGTGTTTATCAAGAAAAGACCTCAAAGCAGGCAATTCAAGGGGTCTGGAAACTATTGCACCTCCTGCGATAGAAGTCTCCAAGAACCCTTTATCCATTGCTCTCTAGGTTGCAAGGTGGATTTTGTGCTGAAACACTACAAGGATCTCTCCCCATACTTGAGAACGTGCAATTCACTACAGCTTAGCCCAGATTTCATCATTCCCCAAGAGATGGGAGAAGATGAGATGACGAATGAAACGCCGCGTTCAACAGTTGTGGACTGTGATGAGCCAATGAGCTCTTTGTCTTCTGGTTCATCAGGCTCTGAGATCAACATGAACATGAGCAGCATGCCTGCTTGCACAGACATtgtgaggaagaagagaagtgCATGGAATGTGTGTGCAAGATTAATGGCTACTAAGGTTAACGACGAGGACATGGTTACTAACATGAGTAGAAGAAAAGGCATCCCTCATAGATCTCCTCTCTGTTA 752 0.4335 MGYQKPAWLEALYTQKFFVGCSYHENAKKNEKNVYCLDCCTSICPHCLPSHRFHRLLQVRRYVYHDVVRLEDLQKLIDCSNVQAYTINSAKVVFIKKRPQSRQFKGSGNYCTSCDRSLQEPFIHCSLGCKVDFVLKHYKDLSPYLRTCNSLQLSPDFIIPQEMGEDEMTNETPRSTVVDCDEPMSSLSSGSSGSEINMNMSSMPACTDIVRKKRSAWNVCARLMATKVNDEDMVTNMSRRKGIPHRSPLC 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g00904 250 Pfam PLATZ transcription factor 60 131 IPR006734 -
Bva06g00904 250 ProSiteProfiles Zinc finger B-box type profile. 21 59 IPR000315 GO:0008270
Bva06g00904 250 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 1 250 - -
Bva06g00904 250 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 1 250 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g00904 Bva-Chr6 7784853 7786179 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Bva06g00904 PLATZ 2.9e-26 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g00904 - - gmx:100781564 442.195
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g00904 06 7784853 7786179 Bva06g00904 06 7784853 7786179 ECH