Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g00879 ATGGAGATTAAGTTCCTGTACTTCAATCTTCTGGCCACTTTCATATTTCTCTTGGCAGTTTCAGCAATCGACCCATATTCAGAAGCACTTCTAAGCCTAAAATCTGAACTTACAGATGCTGATAACAGTTTGCATGACTGGATGGTGCCCTCTGGAGGAAATGCCACCGGAAAAATCTATGCATGTTCTTGGTCCAGTATCAAGTGTGATAAGGACTCAACAACTGTAACTGGCATAGACTTGTCCATGAAGAAATTGGGCGGAGTAATGTCGGGAAAGCAATTTACTGTGTTCACAAAGCTTGTTGATCTCAACCTGAGCCACAATTTTTTCTCTGGGCAGCTTCcggttgaaatttttaaccTCACCAGCCTAAGAAGCTTCGATATCAgcagaaacaatttttctggTCAGTTCCCCGGCGGGGTTTCCAGACTTCAAAATTTAGTTGTGCTTGATGCCTTCAGCAACAGCTTTTCAGGGTCATTGCCAGCTGAACTTTCTCAGCTTGGAAGTTTAAAGGTTCTTAATCTAGCTGGAAGCTACTTCAAAGGACGAATTCCATCTGAATACGGTTCATTTAGAAGCCTCGAGTTTATTCATCTTGCAGGAAATTTTCTCTCCGGAAATATACCTCCAGAACTGGGCAACCTCAAAACAGTGACCCACATGGAGATCGGTTACAATTCTTACCAGGGTTTTATTCCCCCTCAATTAGAGTTGAAGAACCTAAGCCTGCTAAGTCTCATGTACAATGATATGAGCGGCACTGTTCCTCAGGCCATTGCACAACTTCCATCCTTAGAAACTCTTCTAATTTGGAACAATCGTTTCTCTGGACAGCTTCCTCAGAGCTTGGGCAAGAACTCGCAACTAAAGTGGTTGGATGTCTCCACAAACAATTTGATTGGCAGCATACCTCCAGATATTTGTGTGAGAGGAATGCTATTTAAGCTAATCCTGTTTTCGAACAGATTTACAGGAGCTCTTTCACCATCTCTCTCCAACTGCTCTTCACTTGTTCGTCTTCGACTAGAAGATAATCTGTTCGCAGGGAAAATACCTTTTAAATTCAGCCTTCTTTCTGATATCTCATATGTTGACCTGTCTCGGAATAATTTTGTTGGTGGGATTCCCTCAGATATTTCCCAAGCTACCCAACTTCAGTACTTCAACGTCTCCTATAATCCACAATTGGGAGGCATCATCCCGTCAAAAATATGGTCTTTGCCACTTCAAAACTTTTCAGCATCTTCTTGTGGTCTATCAGGTTATCTTCCCTCATTTGAGTCCTGCAAATCGATTTGTGTTATAGAACTGGATAAGAACAGCTTATCTGGATATATCCCCATGAGCGTTTCCAACTGCCAAGCCcttgagaaaatgaaactaTCCAACAATAATCTGTCAGGTCATGTACCTGAAGAGCTAGCAAGTATCCCTGCTCTTAGTGTCGTCGACCTATCAAATAATGATTTCAATGGCCCAATACCAGCAAAATTTGGCAGTTCTTCAAGTTTACAACTTCTTAATGTGTCTTTCAACTACATCTCCGGTACAATTCCCACAGGAAAGCCATTCAAATCGATGGATATCAGTGCATTTGTTGGAAATTCTGAACTATGTGGGGCTCCTTTGCGGCCGTGTCCTGATTCAGTTGGAACATTGAGAAGCAAAGGTTCCTGGAAGCTTACACATATTGTGCTACTCTGTGCAGGGTTGCTTGTATTCCTCGCAGCATTAGCTTTTGGGATCCTTTATTTCAGACGGGGAGTTAAAGGTCAATGGAAGATGGTCTCATTTGTTGGACTCCCTCAATTCACAGCAAATGatgttttgacaagcttcaatgCTGCAGAATCCAGAGAAGTGCCAACACCATCACCAACAATTCTGAAAGCAGTTCTACCAACAGGAATAACAGTTATAGTTAAGAAGATTGAATGGGAAGCAAGGAACATTAAGGTCATGTCAGAATTTATAATGCGACTGGGAAATGCGAGGCACAATAATTTAATGAGACTGTTGGGATTTTGCCATAACCAGCATCTAGCTTATCTTTTATACGATTATTTACCCAATGGAAATTTAGCTGAGAAAATTGGAATGAAAAGGACTTGGGCAGATAAATTCAGAATCGTGGTTGGCATTGCAAGGGGACTTTGCTTCCTTCACCATGAGTGTTTCCCAGCCATACCCCATGGAGACTTGAAGTCGAGCAACATTGTATTCGATGAAAACATGGAACCCCAATTGGCAGAGTTTGGATTCAAACATGTATTACAGTTGAACAAAGGCTTATTTCCAGCAATAACTTCAAGATGGGAAACAGAAAACATTGAAGCTACGAAAGAGGAACTCCACGTGGACGTGTACAATTTTGGGGAGATAATTCTGGAAATTCTAACAAATGGAAGGTTGAAAAATGCAGCGGCTAGCATACACAGCAAACCAAAGGAGGTTCTTCTAAGGGAAATTcacaatgaaaatgaagtgaGTTCTATCAGTCCAATGCAAGAGATAAAATTGGTTCTTGAAGTTGCATTGCTTTGCACTAGGAGCGTGCCACATGATCGGCCATCCATGGAAGATGTGCTGAAGCTTTTTGTCAGGGTTAAAGACACTGGAAAATA 2633 0.4041 MEIKFLYFNLLATFIFLLAVSAIDPYSEALLSLKSELTDADNSLHDWMVPSGGNATGKIYACSWSSIKCDKDSTTVTGIDLSMKKLGGVMSGKQFTVFTKLVDLNLSHNFFSGQLPVEIFNLTSLRSFDISRNNFSGQFPGGVSRLQNLVVLDAFSNSFSGSLPAELSQLGSLKVLNLAGSYFKGRIPSEYGSFRSLEFIHLAGNFLSGNIPPELGNLKTVTHMEIGYNSYQGFIPPQLELKNLSLLSLMYNDMSGTVPQAIAQLPSLETLLIWNNRFSGQLPQSLGKNSQLKWLDVSTNNLIGSIPPDICVRGMLFKLILFSNRFTGALSPSLSNCSSLVRLRLEDNLFAGKIPFKFSLLSDISYVDLSRNNFVGGIPSDISQATQLQYFNVSYNPQLGGIIPSKIWSLPLQNFSASSCGLSGYLPSFESCKSICVIELDKNSLSGYIPMSVSNCQALEKMKLSNNNLSGHVPEELASIPALSVVDLSNNDFNGPIPAKFGSSSSLQLLNVSFNYISGTIPTGKPFKSMDISAFVGNSELCGAPLRPCPDSVGTLRSKGSWKLTHIVLLCAGLLVFLAALAFGILYFRRGVKGQWKMVSFVGLPQFTANDVLTSFNAAESREVPTPSPTILKAVLPTGITVIVKKIEWEARNIKVMSEFIMRLGNARHNNLMRLLGFCHNQHLAYLLYDYLPNGNLAEKIGMKRTWADKFRIVVGIARGLCFLHHECFPAIPHGDLKSSNIVFDENMEPQLAEFGFKHVLQLNKGLFPAITSRWETENIEATKEELHVDVYNFGEIILEILTNGRLKNAAASIHSKPKEVLLREIHNENEVSSISPMQEIKLVLEVALLCTRSVPHDRPSMEDVLKLFVRVKDTGK 877
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g00879 877 SUPERFAMILY Protein kinase-like (PK-like) 631 869 IPR011009 -
Bva06g00879 877 Gene3D Ribonuclease Inhibitor 26 180 IPR032675 -
Bva06g00879 877 Gene3D Phosphorylase Kinase; domain 1 627 689 - -
Bva06g00879 877 Pfam Leucine rich repeat 438 493 IPR001611 GO:0005515
Bva06g00879 877 PANTHER UNNAMED PRODUCT 240 875 - -
Bva06g00879 877 PANTHER UNNAMED PRODUCT 6 239 - -
Bva06g00879 877 ProSitePatterns Serine/Threonine protein kinases active-site signature. 732 744 IPR008271 GO:0004672|GO:0006468
Bva06g00879 877 Gene3D Ribonuclease Inhibitor 314 553 IPR032675 -
Bva06g00879 877 Pfam Leucine rich repeat N-terminal domain 28 70 IPR013210 -
Bva06g00879 877 Pfam Protein tyrosine and serine/threonine kinase 639 867 IPR001245 GO:0004672|GO:0006468
Bva06g00879 877 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE 6 239 - -
Bva06g00879 877 SMART serkin_6 607 870 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva06g00879 877 SUPERFAMILY L domain-like 290 549 - -
Bva06g00879 877 Gene3D Transferase(Phosphotransferase) domain 1 690 876 - -
Bva06g00879 877 Gene3D Ribonuclease Inhibitor 244 313 IPR032675 -
Bva06g00879 877 Gene3D Ribonuclease Inhibitor 181 243 IPR032675 -
Bva06g00879 877 ProSiteProfiles Protein kinase domain profile. 596 870 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva06g00879 877 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE 240 875 - -
Bva06g00879 877 SUPERFAMILY L domain-like 54 309 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g00879 Bva-Chr6 7661512 7665093 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g00879 15 877 Receptor kinase-like Gene Family AT5G51350 50.053 0.0 847
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Bva06g00879 PK_Tyr_Ser-Thr 9.6e-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g00879 - - gmx:100782323 1081.24
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g00879 06 7661512 7665093 Bva06g00879 06 7661512 7665093 ECH