Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g00871 ATGCTAGTCTATCAATTCATGCCAAACAGAAGCTTGGATTTCTACCTTTTTGATCTAATAAGGCGGCATGTGTTGGACTGGAGAAAGCGTGTTCATATCATTGAAGATTTTGGGATGGCTAAACTATTCAGAAAAGATGAACTTGAAGCAAAGACTAAAAGAATTATGGGAACATATGGATATATTCCTCCAGAATATGTAAGAAAAGGCTTATACTCTATGAAGTATGATGTTTACAGTTTTGGAGTGGTACTTTTGCAAATTATAAGTGGCAAGAGGAACACAAGCTACTATGGCACATATGAAAACTTGAGCATTCTTGAATATGCATTTGAGTTGTGGTTGGAAGGTCAAGGCATGGAATTCATTGATCCATCACTGGATGATTCTACTTCATCTTGCAAACTTCTGCAGTGCTTGCAAGTAGCCCTGCTATGTGTGCAAGAAAATCCAGTTGATAGGCCATCAATGTTAGAAGTTTCCTCTATGCTTAAGAATGAAATGGAGGCAATTCGTTTGCCCAAAAGGCCAGCtttctcaataaaaaagaacgaAAAACATGAAGACGGATCATCACAGCAAGAAAAGTTTTCAATTAATGATGCTTCATTTACCCAAATGGCACCTAGATA 632 0.3655 MLVYQFMPNRSLDFYLFDLIRRHVLDWRKRVHIIEDFGMAKLFRKDELEAKTKRIMGTYGYIPPEYVRKGLYSMKYDVYSFGVVLLQIISGKRNTSYYGTYENLSILEYAFELWLEGQGMEFIDPSLDDSTSSCKLLQCLQVALLCVQENPVDRPSMLEVSSMLKNEMEAIRLPKRPAFSIKKNEKHEDGSSQQEKFSINDASFTQMAPR 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g00871 210 MobiDBLite consensus disorder prediction 195 210 - -
Bva06g00871 210 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 1 35 - -
Bva06g00871 210 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 34 206 - -
Bva06g00871 210 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 1 35 - -
Bva06g00871 210 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 34 206 - -
Bva06g00871 210 MobiDBLite consensus disorder prediction 177 194 - -
Bva06g00871 210 SUPERFAMILY Protein kinase-like (PK-like) 1 184 IPR011009 -
Bva06g00871 210 Pfam Protein tyrosine and serine/threonine kinase 18 163 IPR001245 GO:0004672|GO:0006468
Bva06g00871 210 Gene3D Transferase(Phosphotransferase) domain 1 24 178 - -
Bva06g00871 210 MobiDBLite consensus disorder prediction 177 210 - -
Bva06g00871 210 ProSiteProfiles Protein kinase domain profile. 1 171 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g00871 Bva-Chr6 7618982 7621018 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g00871 1 210 Receptor kinase-like Gene Family AT4G11530 37.255 8.06e-57 188
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Bva06g00871 PK_Tyr_Ser-Thr 4.7e-12 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g00871 - - pop:18103406 296.204