Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g00869 ATGGCTTCCAAAATTATTGGTTTCTTggtcttcctcttcctcttgttCCTGAAATCTCATTGTTTTGCAGACGGCCCATCGTGGGTCAGAGCCGGTTTCTATTACACTGGTAGTGAAATTTCTGCTTCAGACATAAAATCGACGCTTTTCACTCACCTCATATgtgcttttgcttttataaaCTCTTCCAACTACAGACTCTCTATCAACTCTACcgaacaagaaaaattctctACCTTCACCAACTCAGTGAAGCACCAAAACCCATCTGTTATAACGCTTATATCCATCTGGTGTGGCAGAGAAAATCCTTCAGCCTTTTCCTCAATGATAAACCAAACCTCTAGTAGGAAATCTTTCATCGATTCTACGATTCAAACAGCTAGGCTATATGGGTTTCACGGCTTTCTCCTTTACGCGGTTAGGCCAAGGTCAGCTTCTGATCTTACCAATTTAGGAATCCTTTTTGAAGATTGGCGAACTGCGTTAACTTCTGAGGCAAGAAACTCTGGCAAAACGGAGTTGATGCTTGTAATGGGGGGTTATTATCTTTCAGCTTCAGACTTCTCTAGTTACCCTTTCGAATCAATGAATAAGAACTTGGACTGGGCACATTTAATAGCCTATGATTACTATCTTCCCACAGAGGACAATACTACAGGTTTTCATGCTGCTTTGTATGGTCCATCTCGGCTGGCTAATACGGATGATGGTGTAAAAGAGTGGAAGAGAAGGGGGTTTTCTTCCAGCAAGCTCGTTGTTGGGTTGCCTTATCATGGATATGCATGGAGACTAGTGAACCCAACAAACAACGCTGTGGGAGCACCTGCATCAGGACCTGCTCTTACAATTAACGGTTCCATGGCTTACAAATTCATTAAAAGTTACATTAGAAGCTTTGGAGACAAATCTGTTCCCGAGTATAATGCAAGTTATGTGGTGAATCAATTCAAAGTTGCAGGAACTTGGATTAATTTTGACGATGTGGAGGCAATCAAGGCTAAGGTTGCTTATGTCAAGAAAAATGGGTTGCTTGGTTATAGTGTGTTCCAGGTGGCTAATGACGAAAATTGGGTCCTTTCACGTGCAGCCCGAGAGGGAGATGGAGATCATCACAAAAGGCGATTGCTGATAATTGTTCTGCTTACGACTCTGGCTATCATTATGCTATTGGGAATAATATTATGGTACTTCCACATAGGCACTGTAGCCGTTGCCagaaaaatactatataaattCACAAGATATTTATCAGTAGCTGAAAGCATTCCTGAAAGAAATGCTTCTGACCTGCTAATATTCAAGTATAGGACAATTAAACTGGCTACGGATAACTTTTCAAATGACAGAAAGCTTGGAGAGGGAGGATTCGGCAAAGTGTACAAGGGTAAATTATGGAAAGGACAAGAAATAGCTGTAAAAAGGCTTTCAAAAACTTCAAATCAAGGTGTTGAGGAGTTCAAAAATGAGGTTATGCTTACGGCAAGACTGCAACATGTGAATTTAGTCAGACTTCTGGGATACTGTACTGAAAGGGATGAGAAGATGCTGATCTACGAATACCTGAAAAATGGAAGCCTATATATTCACCTATTCgATCCAAGTAGATCAATTCATTTAGATTGGAGCAAACGTGTCAAAATCATTGAAGGGATTATTCAAGGGCTCCTCTATCTTCAGGAGTTTTCAAACTTTACCATAATCCACCGAGATTTGAAAgctagtaatattttattggatgAAGAAATGAATCCCAAAATATCTGATTTTGGCATGGCTAGAACTTTTAAGAAAGATGAAATCGAAGCAAACACAGGCAGGATAGTTGGAACATaTGGGTATGTGCCTCCTGAATATGTCAAAAAAGGTATATATTCCATGAAGTTTGATGTCTATAGTTTTGGAGTTCTCTTATTACAAATCATAAGTGGTAAGAGGACCTCATCCTACTATGGCACTCAAGAAAATCTGAACCTTTTGGAACATGCTTACGATCTGTGGGGAGAAGACAAGGGCATGGAATTTATTGATCCATCACTGGATGATACAGCATCGCCTTGTAAAATCATGAGATGCATGCAGGTAGCTCTGTTGTGCGTACAGGAAAAACCTGAGGATAGACCTTCCATGTTACAAGTTTTTTCAATGCTGAAGATTGAGGGTGCAGTTATCAGTACTCCTAAAAAACCTGCATTTTCAGTTAGAAGAGATGaagatagagaagaaaaaggtgaaTACAGGACGGTAATTTCCTCACTCAACGATGTTACCATCTCTCAATTAGAAGCCAGGTG 2294 0.3836 MASKIIGFLVFLFLLFLKSHCFADGPSWVRAGFYYTGSEISASDIKSTLFTHLICAFAFINSSNYRLSINSTEQEKFSTFTNSVKHQNPSVITLISIWCGRENPSAFSSMINQTSSRKSFIDSTIQTARLYGFHGFLLYAVRPRSASDLTNLGILFEDWRTALTSEARNSGKTELMLVMGGYYLSASDFSSYPFESMNKNLDWAHLIAYDYYLPTEDNTTGFHAALYGPSRLANTDDGVKEWKRRGFSSSKLVVGLPYHGYAWRLVNPTNNAVGAPASGPALTINGSMAYKFIKSYIRSFGDKSVPEYNASYVVNQFKVAGTWINFDDVEAIKAKVAYVKKNGLLGYSVFQVANDENWVLSRAAREGDGDHHKRRLLIIVLLTTLAIIMLLGIILWYFHIGTVAVARKILYKFTRYLSVAESIPERNASDLLIFKYRTIKLATDNFSNDRKLGEGGFGKVYKGKLWKGQEIAVKRLSKTSNQGVEEFKNEVMLTARLQHVNLVRLLGYCTERDEKMLIYEYLKNGSLYIHLFDPSRSIHLDWSKRVKIIEGIIQGLLYLQEFSNFTIIHRDLKASNILLDEEMNPKISDFGMARTFKKDEIEANTGRIVGTYGYVPPEYVKKGIYSMKFDVYSFGVLLLQIISGKRTSSYYGTQENLNLLEHAYDLWGEDKGMEFIDPSLDDTASPCKIMRCMQVALLCVQEKPEDRPSMLQVFSMLKIEGAVISTPKKPAFSVRRDEDREEKGEYRTVISSLNDVTISQLEAR 764
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g00869 764 Gene3D Phosphorylase Kinase; domain 1 421 521 - -
Bva06g00869 764 Pfam Protein tyrosine and serine/threonine kinase 448 716 IPR001245 GO:0004672|GO:0006468
Bva06g00869 764 ProSiteProfiles Glycosyl hydrolases family 18 (GH18) domain profile. 28 371 IPR001223 GO:0005975
Bva06g00869 764 SMART 2g34 29 355 IPR011583 GO:0008061
Bva06g00869 764 CDD STKc_IRAK 452 718 - -
Bva06g00869 764 ProSitePatterns Serine/Threonine protein kinases active-site signature. 567 579 IPR008271 GO:0004672|GO:0006468
Bva06g00869 764 SUPERFAMILY Protein kinase-like (PK-like) 431 727 IPR011009 -
Bva06g00869 764 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 21 760 - -
Bva06g00869 764 SMART serkin_6 446 719 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva06g00869 764 ProSiteProfiles Protein kinase domain profile. 446 719 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva06g00869 764 Gene3D Transferase(Phosphotransferase) domain 1 522 726 - -
Bva06g00869 764 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 21 760 - -
Bva06g00869 764 SUPERFAMILY (Trans)glycosidases 34 356 IPR017853 -
Bva06g00869 764 ProSitePatterns Protein kinases ATP-binding region signature. 452 474 IPR017441 GO:0005524
Bva06g00869 764 Pfam Glycosyl hydrolases family 18 33 355 IPR001223 GO:0005975
Bva06g00869 764 Gene3D Glycosidases 43 356 - -
Bva06g00869 764 Gene3D - 258 326 IPR029070 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g00869 Bva-Chr6 7611600 7616216 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g00869 407 764 Receptor kinase-like Gene Family AT4G11530 48.901 4.86e-115 361
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Bva06g00869 Glyco_hydro_18 4e-50 CL0058
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g00869 - - aprc:113847882 1051.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g00869 06 7611600 7616216 Bva06g00869 06 7611600 7616216 ECH