Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g00865 ATGATTGTGGAGGACCAAAGGGGTAAGTTCATGGATGAAGACGGAGCTAGAGACCCATTCCCGGTGGGTATGCGTGTTTTGGCCGTTGACGATGACCCAATTTGTCTCAAGGTGTTGGAGAACTTGCTTCGCAAATGCCACTATCAAGTTACTACAACTAATCAGGCCATTAAGGCGCTGGACATGTTGAGGGAAAACAGAGACAAGTTTGACCTCGTTATTAGTGATGTAAACATGCCAGACATGGATGGTTTTAAGCTCCTTGAGCTTGTGGGGCTTGAAATGGACCTACCTGTCATCATGTTGTCAGCACACAGTGACACGAAGCTTGTGATGAAGGGTGTTACGCATGGAGCATGCGACTATTTGTTAAAACCTGTTCGAATTGAAGAGCTGAAGAACATATGGCAGCATGTAGTCAGAAGAAAGAAGTTTGATGGTAAGGATCTGAATAAGGCCTCCAATGAGGAGAAGGCTCTCAATATGGCTGGGGAAGGTCAAGATGTCACATCAGAAAATAATGCtggtcaaaataaaaatcttggtAAGAAACGGAAGGACCAAATTGAggatgaggaagaagatggTGAAGAGAGTGATGACCCGTCAACGCAGAAGAAGCCTCGTGTAGTTTGGTCTGTTGAGCTGCACAGGAAATTTGTTGCTGCAGTTAATCAGCTGGGCCTTGATAAGGCTGTTCCTAAGAAAATTCTTGACATGATGAATGTTGAAGGGCTCACAAGGGAAAATGTAGCGAGCCATCTGCAGAAATATAGACTCTATCTTAAAAAAGCAACTCAGCAAGCTAACTTTGTTGCTGCATTGGGCACTAATGATTCTCCTTACTTGCGGATGGGCTCGTTAGAAGGGTTTGCAGATTTTCGTTCCTTTTCATCTGGAAGGCTCTCAAGCACTGCGCTATCATCATATGCATCTAATGGAATGTTTAGCAGACTGAACTCCCCAGCTGGCTTGAGCATGAGGGGAATTAGTTCTTCTGGATTGATCCGACCAGGTCAACCTCAAAACTTGAGCAGTTCCATGAACGCTGTCGGAAGCCTACAGCCATCTGTGTTGCCTGCAAATCAAAGCTCAAGTTTATTTCAGGGAACAGCACAACAAAGCAACTGTACAACTAGTATTAGGCAGTTAAGTCCAGTTGATGATACCAATGGTTTTGGAGTTGCCACTAACTTCCCAGACACTAGAGTCACCATGGGTAGTGCAAGCAATTCTGTGTCTTGTGTCCCAAGTAACCATCTGATGTTACAAGGAAACACTCAACAATCTCATAACGTGGGAGCATTCAGAAATCAATCTTCTCTAGGAGCTGCTTCATTAAACGCAGAATCTTTTGATTTGTTGGATTACAATCGTTGTAACGAAAGCTGGCAGGATGCTGTTCAGCTATCTAAATTTCCTGCAAATCCTCTGCCATTGGATGAGACTTTCAACAATGGTCAACTGCCCCCTAGTAGCTTAAGCATTCCTTCCACCAGTCCTCGTATCGGTAACAACTCTGTTTATTTCTCTTCCACAAGTGCCCTTGCTGTTCCATTGGAGGATGCCAGAGGGGACCCACGATGCCAAGAGGGATTAATTGGCAATGTCGTCCAGTCTTCAAGTTACCCTTTGCAGCAAAGATGGGAAGAAGATAAACAAGATTACAATCAAAATATGAATCGTGCTTTCGATTCCATGAATCCATTGGTTCAATCCAATGGAGTTCAAAGTTCCTCAGGGCTGAGTTTCAACCAAAATAATGCATTATCAAGCAAAAGGGTGGATGCATCTTTGATTGGCCCATTAAATGGGGCTATCCAGTCCCTCGGTCATTCTCAATTCTCTTCTGACGCCAGGATGAAGTCAAATTACGCCTACTTTTTGGAGCATATGAAGTCCCAAGATGGTTTCGTTGAGAATAATTTTGGATCCTTGGATGACATAATGAGTTCAATAGTTAAACGGGAGCAGAATGGGGTGATGTTGATGGATGGAGAAACGGGATTTGACGTTTACCCTAATGGATCATGCATTTG 2039 0.4301 MIVEDQRGKFMDEDGARDPFPVGMRVLAVDDDPICLKVLENLLRKCHYQVTTTNQAIKALDMLRENRDKFDLVISDVNMPDMDGFKLLELVGLEMDLPVIMLSAHSDTKLVMKGVTHGACDYLLKPVRIEELKNIWQHVVRRKKFDGKDLNKASNEEKALNMAGEGQDVTSENNAGQNKNLGKKRKDQIEDEEEDGEESDDPSTQKKPRVVWSVELHRKFVAAVNQLGLDKAVPKKILDMMNVEGLTRENVASHLQKYRLYLKKATQQANFVAALGTNDSPYLRMGSLEGFADFRSFSSGRLSSTALSSYASNGMFSRLNSPAGLSMRGISSSGLIRPGQPQNLSSSMNAVGSLQPSVLPANQSSSLFQGTAQQSNCTTSIRQLSPVDDTNGFGVATNFPDTRVTMGSASNSVSCVPSNHLMLQGNTQQSHNVGAFRNQSSLGAASLNAESFDLLDYNRCNESWQDAVQLSKFPANPLPLDETFNNGQLPPSSLSIPSTSPRIGNNSVYFSSTSALAVPLEDARGDPRCQEGLIGNVVQSSSYPLQQRWEEDKQDYNQNMNRAFDSMNPLVQSNGVQSSSGLSFNQNNALSSKRVDASLIGPLNGAIQSLGHSQFSSDARMKSNYAYFLEHMKSQDGFVENNFGSLDDIMSSIVKREQNGVMLMDGETGFDVYPNGSCI 679
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g00865 679 Pfam Myb-like DNA-binding domain 209 259 IPR001005 -
Bva06g00865 679 Gene3D - 203 265 - -
Bva06g00865 679 SUPERFAMILY CheY-like 23 145 IPR011006 -
Bva06g00865 679 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 204 263 IPR017930 -
Bva06g00865 679 SMART REC_2 24 136 IPR001789 GO:0000160
Bva06g00865 679 PIRSF RR_ARR_type-B 2 679 IPR017053 GO:0003677|GO:0003700|GO:0009736
Bva06g00865 679 ProSiteProfiles Response regulatory domain profile. 25 140 IPR001789 GO:0000160
Bva06g00865 679 PANTHER TWO-COMPONENT RESPONSE REGULATOR 4 660 IPR045279 GO:0009736
Bva06g00865 679 SUPERFAMILY Homeodomain-like 204 264 IPR009057 -
Bva06g00865 679 CDD REC_typeB_ARR-like 26 140 - -
Bva06g00865 679 Pfam Response regulator receiver domain 26 134 IPR001789 GO:0000160
Bva06g00865 679 PANTHER TWO-COMPONENT RESPONSE REGULATOR 4 660 - -
Bva06g00865 679 MobiDBLite consensus disorder prediction 162 208 - -
Bva06g00865 679 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 207 260 IPR006447 GO:0003677
Bva06g00865 679 Gene3D - 23 161 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g00865 Bva-Chr6 7590845 7594468 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g00865 13 674 Response Regulator Gene Family AT5G58080 40.548 2.54e-127 389
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-ARR-B Bva06g00865 Response_reg 7e-25 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g00865 K14491 - gmx:100776075 896.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g00865 06 7590845 7594468 Bva06g00865 06 7590845 7594468 ECH