Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g00856 ATGTCTCTCAGAAAATCTCCACTCCCTCGTCTCCTCCTCAACAATGTTTCCTGCATGAGAAATGCCCAACAAATTTTACGTCATGTGAATGTGTCTCTTCATGATGGTAGTGCGCTTGTGCTCACTGGCACAAATGGCTCAGGAAAGACAACATTTCTACGCATGTTAGCTGGATTTTCTCGTCCCTCTGCTGGTGAAATTCTTTGGAATGGCCATGACATTACACAATCAGGAATCTTTCATCAGTATAAGCTTCAGCTCAACTGGCTTTCCCTCAAGGATGCCgttaaagagaaatttacaGTTCTTGACAATGTTCAATGGTTTGAAGTTCTTGAAGGCAAGCAGGGAAGATCCTTGCCTGCTCTTGAGTTTATGGGGCTAGGAAGATTGGTAAATGAGAAGGCAAGGATGCTGTCCATGGGCCAGCGAAAAAGATTGCAACTTGCCAGATTGCTAGCAATTGATCGCCCAATTTGGTTGCTAGATGAGCCTTCAGTTGCATTAGATTATGAAGGAGTGAAGTTACTTGAGTATATTATTGCAGAACACAGAAAGAAGGGTGGGATTGCGATTGTGGCAACTCATTTACCAATTGACATTGAAGATGCCATGATCTTGAGGCTGCCACCGAGGTTTCCAAGGAGAATGACTTTAGTGGATATGCTGGATCGTGCAGACATTTA 686 0.4286 MSLRKSPLPRLLLNNVSCMRNAQQILRHVNVSLHDGSALVLTGTNGSGKTTFLRMLAGFSRPSAGEILWNGHDITQSGIFHQYKLQLNWLSLKDAVKEKFTVLDNVQWFEVLEGKQGRSLPALEFMGLGRLVNEKARMLSMGQRKRLQLARLLAIDRPIWLLDEPSVALDYEGVKLLEYIIAEHRKKGGIAIVATHLPIDIEDAMILRLPPRFPRRMTLVDMLDRADI 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g00856 228 Gene3D - 5 208 IPR027417 -
Bva06g00856 228 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 11 228 IPR003439 GO:0005524
Bva06g00856 228 PANTHER ABC TRANSPORTER I FAMILY MEMBER 1 9 223 IPR005895 GO:0017004|GO:0022857
Bva06g00856 228 SMART AAA_5 35 223 IPR003593 -
Bva06g00856 228 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 10 197 IPR027417 -
Bva06g00856 228 TIGRFAM ccmA: heme ABC exporter, ATP-binding protein CcmA 13 209 IPR005895 GO:0017004|GO:0022857
Bva06g00856 228 Pfam ABC transporter 26 166 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g00856 Bva-Chr6 7563425 7565385 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g00856 24 178 Calmodulin-binding Proteins AT2G36910 28.070 4.52e-12 63.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g00856 - - cit:102628223 411.379