Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g00849 ATGTCAGGAGAAGAAGCTGCTGTAGCACCTGCTGAGGCTTCAGCACCTCTAGGTGAGGCTATGGACATCATGACAGCATTGCAGCTTGTGCTGAGGAAATCACTAGCCCATGATGGGCTTGCCCGAGGACTCCATGAAGGTGCTAAGGTGATTGAAAAGCATGCAGCACATCTCTGCGTGTTAGCCGAGGACTGTGACCAGCCAGATTATGTTAAATTGGTCAAGGCACTTTGTGCCGATCACAATGTCAAGTTGATGACAGTAGATAGTGCTAAAACTCTTGGAGAATGGGCTGGGCTGTGCAAGATTGATTCTGAGGGAAAAGCGAGGAAAGTAGTTGGTTGCGGCTGCATTGTTGTGAAGGACTTTGGAGAGGAGTCACCAGCATTAGATGTTGTTCAGCAATATATCAAGGCTCAATA 422 0.4787 MSGEEAAVAPAEASAPLGEAMDIMTALQLVLRKSLAHDGLARGLHEGAKVIEKHAAHLCVLAEDCDQPDYVKLVKALCADHNVKLMTVDSAKTLGEWAGLCKIDSEGKARKVVGCGCIVVKDFGEESPALDVVQQYIKAQ 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g00849 140 Pfam Ribosomal protein L7Ae/L30e/S12e/Gadd45 family 26 119 IPR004038 -
Bva06g00849 140 ProSitePatterns Ribosomal protein S12e signature. 26 44 IPR000530 GO:0003735|GO:0005840|GO:0006412
Bva06g00849 140 PRINTS Ribosomal protein S12E family signature 44 60 IPR000530 GO:0003735|GO:0005840|GO:0006412
Bva06g00849 140 PRINTS Ribosomal protein S12E family signature 85 106 IPR000530 GO:0003735|GO:0005840|GO:0006412
Bva06g00849 140 PRINTS Ribosomal protein S12E family signature 110 123 IPR000530 GO:0003735|GO:0005840|GO:0006412
Bva06g00849 140 PRINTS Ribosomal protein S12E family signature 30 43 IPR000530 GO:0003735|GO:0005840|GO:0006412
Bva06g00849 140 PANTHER 40S RIBOSOMAL PROTEIN S12 1 140 IPR000530 GO:0003735|GO:0005840|GO:0006412
Bva06g00849 140 Gene3D - 6 140 IPR029064 -
Bva06g00849 140 PANTHER 40S RIBOSOMAL PROTEIN S12 1 140 - -
Bva06g00849 140 SUPERFAMILY L30e-like 18 139 IPR029064 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g00849 Bva-Chr6 7534867 7537039 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g00849 19 140 Cytoplasmic Ribosomal Protein Gene Family AT2G32060 70.492 1.25e-62 187
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g00849 K02951 - jre:109000847 231.491
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g00849 06 7534867 7537039 Bva06g00849 06 7534867 7537039 ECH