Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g00848 ATGGCTCAAATTCTGAATTTTCAGATAGGTGCTGTATGTGATGTTCCCCACTTGAAAAAACATGATATCGCTGCAAATCGTCCATGTCAAGTCAATACAGAGATTCTGGAAGGAGATGTGTACAAGTACTACTCTGATGGAGAATGGAGGAAATCTTCTTCAGGGAAAAGCGTTGCCATCATCAATCCCACTACCAGAAAGACTCAATACAAAGTTCAGGCTTGTACACAGGAAGAAGTTAATAAGGTGATGGATTCGGCAAAATCTGCACAGAAGTCATGGGCAAAGACCCCACTATGGAAGAGAGCTGAGCTTCTTCACAAGGCAGCCGCTATTCTGAAAGAGCACAAAGCTCCAATTGCAGAGTGCCTAATCAAAGAAATAGCCAAGCCAGCCAAAGATTCAGTGACTGAGgTTGTAAGATCTGGGGATCTGGTTTCTTACTGTGCTGAAGAAGGGGTAAGGATATTGGGAGAGGGAAAGTTCTTGGTTTCAGACAGTTTTCCGGGAAATGAAAGGACAAAATACTGCCTCACTTCCAAGATCCCATTAGGAGTGGTTTTGGCCATTCCACCATTTAACTATCCAGTCAATCTTGCTGTCTCAAAAATCGCCCCAGCTTTGATTGCTGGAAACTCCCTTGTGCTCAAGCCTCCAACTCAGGGAGCTGTTTCTTGCCTGCATATGGTGCACTGTTTTCACTTGGCTGGTTTTCCCAAAGGCCTAATCAGTTGTGTTACTGGCAAAGGCTCCGAGATTGGTGACTTCCTTACTATGCATCCAGGGGTGAACTGTATAAGCTTCACTGGAGGCGATACAGGCATTGCGATCTCAAAGAAGGCAGGTATGATTCCACTGCAAATGGAGTTGGGAGGAAAAGATGCCTGCATTGTGCTTGAGGATGCTGACCTCGATCTGGTGGCTGcaaacattataaaaggagGCTTTTCGTACAGtggtCAGAGGTGCACTGCTATTAAGGTTGTCTTGGTGATGGAATCCGTTGCTGATGCTTTAGTGGAGAAAGTAAAGGCTAAGGTTGCAAAATTGAGGGTTGGACCACCTGAAGATGACTCTGATATCACCCCAGTTGTGACAGAATCATCAGCCAACTACATTGAAGGTCTGGTTTTGGATGCCAAAGAGAAAGGAGCAACATTCTGCCAAGAATACAGGAGAGAAGGAAATCTCATTTGGCCCTTGCTGCTGGATAATGTCAGGCCTGACATGAGAATAGCTTGGGAGGAGCCATTTGGACCAGTTTTACCAGTTATTAGAATCAACTCTGTTGAAGAAGGAATCCACCACTGCAATGCCAGCAATTTTGGACTTCAGGGTTGTGTCTTCACAAAGGATGTCAATAAAGCAATATTGATCAGTGATGCAATGGAGACTGGAACAGTTCAAATAAACTCAGCCCCAGCTCGTGGACCAGATCATTTTCCCTTCCAGGGTATAAAGGACAGTGGAATTGGATCACAAGGAATCACCAACAGCATAAATATGATGACAAAGGTCAAGACCACCGTGATCAACTTACCCACACCTTCTTATACCATGGGCTA 1565 0.4428 MAQILNFQIGAVCDVPHLKKHDIAANRPCQVNTEILEGDVYKYYSDGEWRKSSSGKSVAIINPTTRKTQYKVQACTQEEVNKVMDSAKSAQKSWAKTPLWKRAELLHKAAAILKEHKAPIAECLIKEIAKPAKDSVTEVVRSGDLVSYCAEEGVRILGEGKFLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQGAVSCLHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPGVNCISFTGGDTGIAISKKAGMIPLQMELGGKDACIVLEDADLDLVAANIIKGGFSYSGQRCTAIKVVLVMESVADALVEKVKAKVAKLRVGPPEDDSDITPVVTESSANYIEGLVLDAKEKGATFCQEYRREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVFTKDVNKAILISDAMETGTVQINSAPARGPDHFPFQGIKDSGIGSQGITNSINMMTKVKTTVINLPTPSYTMG 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g00848 521 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 47 508 IPR016162 GO:0016491
Bva06g00848 521 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 292 482 IPR016163 GO:0016620
Bva06g00848 521 PANTHER NADP-DEPENDENT GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE 31 521 - -
Bva06g00848 521 CDD ALDH_F11_NP-GAPDH 40 512 - -
Bva06g00848 521 SUPERFAMILY ALDH-like 40 512 IPR016161 GO:0016491
Bva06g00848 521 Pfam Aldehyde dehydrogenase family 49 508 IPR015590 GO:0016491
Bva06g00848 521 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 288 295 IPR029510 GO:0016491
Bva06g00848 521 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 316 327 IPR016160 GO:0016491
Bva06g00848 521 PANTHER ALDEHYDE DEHYDROGENASE 31 521 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g00848 Bva-Chr6 7529061 7533461 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g00848 34 521 Aldehyde Dehydrogenase Gene Family AT2G24270 91.598 0.0 943
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g00848 K00131 - cpap:110815770 944.11