Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g00847 ATGATTATGCAGCCTCATAACAGAGAAATGCAAGGAATAAACTCCCTCTTAAACTCTTCTCAGATTTCTGTGCAGGACCTCCATAACAACCCCcatcagcagcagcagcagcagcagatCCAAAATTCTCAGATGCACCACCACCAGCTCAATCAGAGCTCCGGGCACTTTGATCCCACCTCCCACGACGATTTTCTCGAGCAAATGCTTTCCGCACTTCCTTCCTGCTCCTGGCCTGAGCTCAATCCTGCCAACCCCAAGCCTTTGTGGGACCTTAATCCCGCCAATTCCGTCCATATCAACGGTTCTGATATAAAGCCCATAGACCTCTCTGATGACGCGACTCCCTCTAACGCTGATAATGTTGCTTTTCCCTATGATGAGCATGCCAACTTGGCCTCCAAGTTCCGAAACCACCAGATCAGTGGCAGTTCTCCGTCATCTAAGTCCACGGTGGCCGCTTTGATGCTTCAGCAGCAGCTTCTTATGTCGAGAGGTGTCTCTTCCGGGGAGTCTGGTCTTCTTCAGATGCCGTTATCATTGGGTGGCGGAGACTTTGAGCGATCTCGCAACGACGTCATCGACGGTTCACCGTTTAAAGCGTCTAATCCGGCTAACGAGAGTTCAGTCCAAGCTCTTTACAATGGGTTCACCGGATCTCTGCATGGCACTGGTCAATCTTCGAACCAGACTCAGCATTTTCATCATCCTCAGGGGCAGAATTTTTCGGGGTCAGGCGCGGCGACGAACCAACCTCCAGCAAATGGGACGGCAAATGGTGCTCCGGCACAACCCAAGCCGAGAGTTAGAGCCAGGAGAGGTCAAGCCACGGACCCACATAGCATAGCTGAGAGGTTACGAAGGGAGAGAATTGCAGAGAGAATGAAGGCCCTGCAGGAACTGGTTCCCAATGCCAACAAGACAGACAAGGCCTCAATGCTGGATGAGATAATCGATTATGTGAAGTTCCTACAGCTCCAAGTCAAGGTTCTGAGCATGAGTAGATTGGGCGGTGCAGCTGCTGTTGCTCCCCTAGTTGCTGATGTGTCCTCCGAgGGAGGAGGCGGCGACTGCATCCAAGCCACCGCGAACGGTGGTCGTAACTCCAACGGCAACCAAACTGCATCGTCGTCCAACGACGGCCTCACCATGACGGAACACCAAGTTGCAAAGCTCATGGAAGAAGACATGGGATCTGCCATGCAGTACCTTCAGAGCAAAGGTCTCTGCCTCATGCCCATCTCCCTTGCCACCGCTATCTCTACCGCCACGTGTCACTCCAGGAACCGCCTGATGAACGGTGGCACCAATCATCAGGGCAACACCAATAACATTCCCGTCATCGCATCGAACGGCGAAGGTCCCTCCTCTCCCAGCATGTCCGTGTTGACTGTCCAGTCAGCTGCCGTGGCTAACGGCGGTTCTGACAGCTCCGTTAAAGACGCTGCGTCCGTTTCGAAGCCGTG 1466 0.5232 MIMQPHNREMQGINSLLNSSQISVQDLHNNPHQQQQQQQIQNSQMHHHQLNQSSGHFDPTSHDDFLEQMLSALPSCSWPELNPANPKPLWDLNPANSVHINGSDIKPIDLSDDATPSNADNVAFPYDEHANLASKFRNHQISGSSPSSKSTVAALMLQQQLLMSRGVSSGESGLLQMPLSLGGGDFERSRNDVIDGSPFKASNPANESSVQALYNGFTGSLHGTGQSSNQTQHFHHPQGQNFSGSGAATNQPPANGTANGAPAQPKPRVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGGAAAVAPLVADVSSEGGGGDCIQATANGGRNSNGNQTASSSNDGLTMTEHQVAKLMEEDMGSAMQYLQSKGLCLMPISLATAISTATCHSRNRLMNGGTNHQGNTNNIPVIASNGEGPSSPSMSVLTVQSAAVANGGSDSSVKDAASVSKP 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g00847 488 MobiDBLite consensus disorder prediction 28 59 - -
Bva06g00847 488 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 273 335 IPR036638 GO:0046983
Bva06g00847 488 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 57 436 - -
Bva06g00847 488 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 275 324 IPR011598 GO:0046983
Bva06g00847 488 MobiDBLite consensus disorder prediction 28 62 - -
Bva06g00847 488 Gene3D - 270 332 IPR036638 GO:0046983
Bva06g00847 488 MobiDBLite consensus disorder prediction 220 283 - -
Bva06g00847 488 PANTHER TRANSCRIPTION FACTOR BHLH69 57 436 - -
Bva06g00847 488 MobiDBLite consensus disorder prediction 220 258 - -
Bva06g00847 488 Pfam Helix-loop-helix DNA-binding domain 280 325 IPR011598 GO:0046983
Bva06g00847 488 MobiDBLite consensus disorder prediction 432 462 - -
Bva06g00847 488 SMART finulus 281 330 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g00847 Bva-Chr6 7522185 7525835 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g00847 254 487 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G24260 62.500 3.35e-91 276
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Bva06g00847 HLH 1.9e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g00847 - - qsu:111987215 562.762